| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3116 |
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| Symbol | |
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| ID | 6112066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3451040 |
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| End bp | 3452827 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622901 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001749975 |
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| Protein GI | 170722287 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.583014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CCCCGAAACG CCCGCTGCGC AGTCAGCAAT GGTTCGACGA CCCGAGCCAC
GCCGACATGA CCGCGCTGTA CGTCGAGCGC TACATGAACT ACGGCCTGAC CCGCGATGAA
CTGCAATCGG GGCGGCCGAT CATTGGCATC GCACAGACCG GAAGTGACCT GACGCCCTGC
AACCGCCACC ACCTGGAACT GGCCCAGCGG GTCAAGGCCG GCATCCGTGA TGCTGGAGGC
ATTCCGATGG AATTCCCGGT GCACCCTATA GCCGAACAGA GCCGTCGGCC CACCGCCGCG
CTCGACCGCA ACCTGGCATA CCTGGGGTTG GTGGAAATCC TTCATGGCTA CCCGCTGGAT
GGCGTGGTGT TGACCACCGG CTGCGACAAG ACTACGCCAG CCTGCTTGAT GGCCGCCGCC
ACCACCGACC TGCCGGCCAT TGTGCTGTCC GGCGGGCCAA TGCTCGACGG CCATCACAAG
GGCCAGCTGA TCGGTTCGGG CACGGTGCTG TGGCACGCAC GCAATCTGAT GGCTGCCGGC
GAAATCGACT ACGAAGGCTT CATGGAAATG ACTACCGCCG CTTCGCCGTC GGTTGGCCAC
TGCAACACAA TGGGCACGGC GCTGTCGATG AACGCTCTGG CCGAAGCCCT TGGCATGTCG
CTGCCCGGTT GCGCCAGTAT CCCCGCGCCC TATCGGGAGC GCGGGCAGAT GGCCTACGCC
ACCGGCAGGC GCATCTGCGA GTTGGTGATG CAAGACGTAC GCCCCTCATC AATCATGACC
CGAGAAGCAT TCGAGAACGC CATCGCTGTA GCCTCGGCGC TAGGCGCCTC AAGCAATTGC
CCACCACACT TGATCGCCAT CGCTCGACAC ATGGGCATCG AGCTGTCGCT CGACGACTGG
CAGCGCATTG GCGAAGACGT GCCGCTGCTG GTCAACTGCA TGCCGGCGGG CAAGTACCTG
GGCGAAGGTT TCCACCGTGC CGGTGGCGTA CCGGCGGTGA TGCACGAATT GCGCAAGGCA
GGCCGCCTGC ACGAAGCCTG CGCCACGGTC AGCGGCAAGA CCATCGGCGA GGTGGTCAGC
GACACGGTCA CCAGCAACCG CGACGTGATT CTGCCGTTCG ACGAGCCGCT CAAGCACAGC
GCTGGGTTCA TCGTTCTCAG TGGCAATTTC TTCGACAGCG CGATCATGAA GATATCGGTA
GTCGGCGAAG CCTTCCGCAA GACCTATCTG TCAGAGCCCG GCAAGGAAAA CAGCTTCGAG
GCGCGGGCCA TCGTGTTCGA GGGCCCCGAG GACTACCACG CGCGCATCGA TGACCCAGCA
CTGGACATCG ACGAGCGTTG CATCCTGGTG ATCCGTGGCG CCGGCACCGT GGGTTACCCG
GGTAGTGCAG AGGTGGTCAA CATGGCGCCA CCGGCGGCGC TGATCAGAAA GGGCATCGAC
TCGCTGCCGT GCCTGGGCGA CGGTCGCCAG AGCGGCACCT CGGCCAGCCC GTCGATTCTC
AACATGTCGC CGGAAGCGGC GGTCGGGGGC GGCCTGGCAC TGCTTCAGAC CAACGACTTG
CTGCGCGTCG ACCTCAACCA ACGTCGCGTC GACCTGCTGG TAGACGACAA GGAAGTGGAG
CGCCGTCGCG CAGCCTGGAA GCCGAACATC CCAATCTCTC AGACACCATG GCAAGAGCTC
TACCGCCAAT TGGTCGGGCA ATTGTCCACC GGTGGCTGCC TGGAACCGGC CACCCTGTAC
ATGCGTGTGA TTGCCCGCGA AGGAGGGATG CCACGACATT CCCATTGA
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| Protein sequence | MTDTPKRPLR SQQWFDDPSH ADMTALYVER YMNYGLTRDE LQSGRPIIGI AQTGSDLTPC
NRHHLELAQR VKAGIRDAGG IPMEFPVHPI AEQSRRPTAA LDRNLAYLGL VEILHGYPLD
GVVLTTGCDK TTPACLMAAA TTDLPAIVLS GGPMLDGHHK GQLIGSGTVL WHARNLMAAG
EIDYEGFMEM TTAASPSVGH CNTMGTALSM NALAEALGMS LPGCASIPAP YRERGQMAYA
TGRRICELVM QDVRPSSIMT REAFENAIAV ASALGASSNC PPHLIAIARH MGIELSLDDW
QRIGEDVPLL VNCMPAGKYL GEGFHRAGGV PAVMHELRKA GRLHEACATV SGKTIGEVVS
DTVTSNRDVI LPFDEPLKHS AGFIVLSGNF FDSAIMKISV VGEAFRKTYL SEPGKENSFE
ARAIVFEGPE DYHARIDDPA LDIDERCILV IRGAGTVGYP GSAEVVNMAP PAALIRKGID
SLPCLGDGRQ SGTSASPSIL NMSPEAAVGG GLALLQTNDL LRVDLNQRRV DLLVDDKEVE
RRRAAWKPNI PISQTPWQEL YRQLVGQLST GGCLEPATLY MRVIAREGGM PRHSH
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