| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3113 |
|---|
| Symbol | |
|---|
| ID | 6112063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3447329 |
|---|
| End bp | 3448273 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641622898 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001749972 |
|---|
| Protein GI | 170722284 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.781375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACC TTTCTTTTTC TCACGTCTGC AACTGGCTTA AGTTCCGCCA CCTCCTGCTC
ATCGACACAC TCGGCCGCAC CCACAACATG CATCTGGCAG CACAGCAGAT GAACCTCAGC
CAGCCGGCGA TCAGCAAGAT GCTCAAGGAG ATCGAGAACC TGCTCGGCTT CGCCCTGTTC
GAGCGTCTGC CACGAAGCAT GCCGCCCACC GCCCTGGGCG AGCAGGTGGT GCGCTATGCA
CAGATCGCTC TCAATGATGC TCGGAACTTC GTCGACCAGA TCGACAGCTT GCGCCAAGGA
GGCCACGGTC ATTTGAAGGT TGGCGGCATC TTTGCCGCCA CCGCCGTGGC ATTGCCCGAT
GCCATTGTCG AGATCAAGCA GCGCAAGCCG CTGCTTTCGA TCGAGGTGGT GGAGCAGACC
AGCGACCATC TCATGGCAAT GTTGGAGGAC AAGAACCTTC ACTTGGCGGT AGCGCGATTC
ACCGATGTTT CACAGTGCCA ACGCTTCGAC TTCCAGCCCC TGGCGCCGGA GCCGTTCTGC
TTCGTGGTTA ACGACCAGCA CCCTTTGAGC GAAGCCGGGC CGGTGACGCT ACCTCAGTTG
CTCGAGTGGC CGTGGATCCT CTACCCCAAA GGCACGCCAA TTCGCGGTCG CATGGAGCGC
GCGTTCGCCG AGGCGGGCGT CGCAGTGCCA CGCAACACAA TCGACACCAT TTCAATGCAG
ACCTTCCTCA AGGTGCTGTT GGGTGGCCCG ATGATCGGCA TGTTGCCCCA GGCGATGGTC
GAGCCACATA TTGCCAGCGG GGTACTCATC AACCTCGACA CGCCGCTGCA CCTGCCTCCC
CAGGATTACG GCATCCTGAC CCGCAAAGGC GAGCTCTTGA CCGGTGTAGC GTTGGAGTTT
GCCGAGATAT TGGTGAACAA CGCAGGAAGG GCGCAGACGG ACTGA
|
|---|
| Protein sequence | MSDLSFSHVC NWLKFRHLLL IDTLGRTHNM HLAAQQMNLS QPAISKMLKE IENLLGFALF
ERLPRSMPPT ALGEQVVRYA QIALNDARNF VDQIDSLRQG GHGHLKVGGI FAATAVALPD
AIVEIKQRKP LLSIEVVEQT SDHLMAMLED KNLHLAVARF TDVSQCQRFD FQPLAPEPFC
FVVNDQHPLS EAGPVTLPQL LEWPWILYPK GTPIRGRMER AFAEAGVAVP RNTIDTISMQ
TFLKVLLGGP MIGMLPQAMV EPHIASGVLI NLDTPLHLPP QDYGILTRKG ELLTGVALEF
AEILVNNAGR AQTD
|
|---|
| |