| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3110 |
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| Symbol | |
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| ID | 6112060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3443257 |
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| End bp | 3444195 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641622895 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001749969 |
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| Protein GI | 170722281 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.304071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA GCCAAGGAGC AAGCCAGCGC CAGGCGCTGC TGATGTTGGC GCCGTTGCTC
GACGAACACG AAAAAAAGCT CGCCAAGCAA TTTGATTTGG TACGAGCGTT TGATTCGAAG
GCCCAAGAGG CTGTTCTGGC CGACCGGCCG GAACGTTTCC GCGCGGTGGT GACCAACGGA
GTGATGGGGG TGCCAACCAC GGCCGTTGGC GCGCTGGTCA ATCTTTCATT GATCGCCGTG
AACGGTGTTG GAGTTGATGG CATTGATTTG GACCAGGTGA AAGCCCGCGG CATTCGGGTT
GAGACGACGA TCGATATCCT GACGGATGCG GTGGCGGATC ACGCAGTGGC ATTGCTTTTG
AGCCTGCTGC GCCAGGTCTG CGTGGCTGAC CGATTCGTCC GGGCAGGCAT GTGGCGTGAG
GGCGCGTTCC CTTCGCTAGG TACCACGTTG CGAGGGCTGC GCGTCGGCAT AATAGGCCTC
GGACGTATAG GACAAGCGAT TGCGAGTCGC CTGTTGCCGT TCGGAGTCAA GTTGGCGTAC
CACAACCGCA ATGAGGTGTA TGGCTGCAAT TATGCCTACC ACTCCAACGC CTGCAGCCTA
GCCGCCTACA GCGACATTCT TATCGTGGCT GCCGCAGGAG GAAATGCCAC GTCGCGCCTG
GTCAATGCGA CAGTGCTGGA AGCGCTTGGG GCGAAAGGCT TCATCGTCAA CGTGGCGCGG
GGTAGTGTGA TCGACGAAGC GGAACTGGTT GCGCGATTGC AGGACGGGCG GCTTGGAGGG
GCGGCCCTGG ACGTGTACAT AGATGAGCCA CAAGTCCCCC CCAGCTTGTT TGACCTGGAC
AACGTAGTGC TTCAACCGCA CATAGGCAGC GCCACTCTGC AGACAAGGAA GGCGATGGGA
GACTACGTCG TTAATGCGGT TTGTCGATGT ACGCGGTGA
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| Protein sequence | MSISQGASQR QALLMLAPLL DEHEKKLAKQ FDLVRAFDSK AQEAVLADRP ERFRAVVTNG
VMGVPTTAVG ALVNLSLIAV NGVGVDGIDL DQVKARGIRV ETTIDILTDA VADHAVALLL
SLLRQVCVAD RFVRAGMWRE GAFPSLGTTL RGLRVGIIGL GRIGQAIASR LLPFGVKLAY
HNRNEVYGCN YAYHSNACSL AAYSDILIVA AAGGNATSRL VNATVLEALG AKGFIVNVAR
GSVIDEAELV ARLQDGRLGG AALDVYIDEP QVPPSLFDLD NVVLQPHIGS ATLQTRKAMG
DYVVNAVCRC TR
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