| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3107 |
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| Symbol | |
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| ID | 6112057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3440425 |
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| End bp | 3441861 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622892 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001749966 |
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| Protein GI | 170722278 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.936861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCT CCCCCAAGCC GCCTTTTGCT CCCTTGGAAG AGCAGTCCGC CTTGCCCCTG
TATCGTCAAC TGTACGACCG CGTGCTGGCC GCCGTTGCCG CTGGCACGTT GTCCCCCGGT
GACCGCTTGC CGTCGGCGCG CGCCATGGCT AAGGAGCTGG GGGTGGCACG TGGCACCGTC
GAACTGGCCT ATTCGCTGAT GGCCAGCGAA GGGTACCTCC TGGCGCTCGG GCAGAAAGGC
ACCGTAATCA ATCCTGAACT GCAGAAGCCT GTGTCAGCGG CCACCGTATT ACCAGTCAGC
AGCCAAGTGA TCGAAGACGC GCCTGATTCG CTCTGGCGCC CACCGCAGCT GTTGCCGTTC
CAGATGGGGG TACCGGCGCT GGATGCATTT CCGCGCAAGA TATGGGCGCG TCTCGGTGCT
CGGTATCTCC GTGGGATGCG TCTGGGAGAT CTGGACTATC CAGCACCCCA CGGCCTGGCA
GCGTTGCGCA GCGCCATTGC TTCGTATCTG CAGGTGTCCC GAGGTATCGA TTGCGGTGCC
CATCAGGTGT TTATCACCAG CGGTTGGCGC AATAGCCTGT CTTTAGTCGC ACATACCCTG
TTGCAGCCAG GCGAGTGCGC CTGGGTGGAA GACCCGGGCT ATCCCACTAC GCGCCAGGTG
CTTCGCCAGT TCGGCCTGGA CCTGGAAGCG GTGCCGGTTG ATGCCGAAGG CATGAACGTA
GAACACGCCA TCGCGGGTTC TCGGGCTGCT CAGGTCGTCA TGGTGACACC AGGGCATCAG
AGCCCGCTGT CGATGGCACT GTCGCTGCCA CGCCGACAAC TGCTACTCGA TTGGGCTGCC
CGCACCGGTG GCTGGATTGT CGAGGACGAT TACGACGGCG AGTACCGCTA CGTCAGCCGT
CCACTTCCAG CGCTGGCCAG CTTGGATCGC CATGGGCGCG TGCTGTATGC CGGCACCTTC
AGCAAGGTGC TGTTTCCCGG TATTCGCCTG GCTTATCTGG TGGTGCCGCA GGCGCAGGTG
GCAGCGTTCG AGCGCGTCGG ACGGGCCTTG TTTGCTGCCG GGTCACCGTC AATTACCCAG
GCTTTGGTGG CGGAGTTCGT TGCCGAGGGA CACTTCGCTC GGCACATCCA ACGCATGCGC
CGCCTCTACA ACGAACGACG GGCATTGACC ATCGAAGCAC TGGAGCGGAG TTTGCCGAAG
GGTATGCAGG TGGAACGCTC GCCAGGCGGT ATGCACCTGG TACTGCGTTT GCCGGAGGAC
GTAAGCGACA CCGCCCTGGC CGAGCAGGTG CTGGCGAGGG GCATGTCGGT ACAAGCGTTG
TCGCGCTGGG CTGCCTCATC GCAGCGTCAG TCAGGTCTGC TCCTGAGTTT TACCAACTGC
GCCACGACTG CTCCAGGCGA GCAGCTTGGC GCGTTGATCA GCAAGTTACT CAGTTGA
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| Protein sequence | MMTSPKPPFA PLEEQSALPL YRQLYDRVLA AVAAGTLSPG DRLPSARAMA KELGVARGTV
ELAYSLMASE GYLLALGQKG TVINPELQKP VSAATVLPVS SQVIEDAPDS LWRPPQLLPF
QMGVPALDAF PRKIWARLGA RYLRGMRLGD LDYPAPHGLA ALRSAIASYL QVSRGIDCGA
HQVFITSGWR NSLSLVAHTL LQPGECAWVE DPGYPTTRQV LRQFGLDLEA VPVDAEGMNV
EHAIAGSRAA QVVMVTPGHQ SPLSMALSLP RRQLLLDWAA RTGGWIVEDD YDGEYRYVSR
PLPALASLDR HGRVLYAGTF SKVLFPGIRL AYLVVPQAQV AAFERVGRAL FAAGSPSITQ
ALVAEFVAEG HFARHIQRMR RLYNERRALT IEALERSLPK GMQVERSPGG MHLVLRLPED
VSDTALAEQV LARGMSVQAL SRWAASSQRQ SGLLLSFTNC ATTAPGEQLG ALISKLLS
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