Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3105 |
Symbol | |
ID | 6112055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3439156 |
End bp | 3439821 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641622890 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_001749964 |
Protein GI | 170722276 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.364568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGT CCCAACAGCC ACTTGCTCCT TTGCGCATTC TTCGCCTGGT CGCCAGCCCC AATGCAGAGG CTTCGGAAAG TCTGAAACTG TCCCAGCAGA TCCTATTTGC CTTGGCCAGT CAGGCCGGCA GAAGGGGTAT CCAGTTGACC GATTTAGACC TCAACACCTT GGTCCCAGTT GATTCGCCTT ACGCCCAGGC GTTGGCCAAT CAGCGCGTAG TCATAGCAAG CGGTCAGAAG GGTACGTTGA GCCGTTCCGA CGAGTTGATC GACCAACTAC AGGCATGCGA CGTACTGCTG ATTGCCACGC CGATGCACAA CTATAGCGTG CCCGCCCCAC TCAAGATGTG GATCGACCAC GTGGTACGCG TGGGCAAAAC GTTTTTGGGC ACCGCCAAAG GCAAAGTCGG AAATCTGACG GATCGTCCGG TTTACGTCGC AATCGCTAGC GGGGGCTATA TCAGCGGCCC ACAGGCCCGT CAACCGGACT TTCTGCGCCC CTACCTGTCC GCCGTCCTTG CCACCATCGG TCTCACTCAG GTGCATTACT TCACCGTTGA GGGTACCGCC AAGGGGGGGG AGTCACTGAA TACTGGAAGG GCAACAGGGT ACGGTGATGT GCAGGCGTAC TTTGTTAGGC ATAGCCGTCG AGTGGATCAA GTCTAA
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Protein sequence | MTSSQQPLAP LRILRLVASP NAEASESLKL SQQILFALAS QAGRRGIQLT DLDLNTLVPV DSPYAQALAN QRVVIASGQK GTLSRSDELI DQLQACDVLL IATPMHNYSV PAPLKMWIDH VVRVGKTFLG TAKGKVGNLT DRPVYVAIAS GGYISGPQAR QPDFLRPYLS AVLATIGLTQ VHYFTVEGTA KGGESLNTGR ATGYGDVQAY FVRHSRRVDQ V
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