| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3104 |
|---|
| Symbol | |
|---|
| ID | 6112054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3438595 |
|---|
| End bp | 3439044 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641622889 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_001749963 |
|---|
| Protein GI | 170722275 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.207419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTC TCAATTGGTT TGAAGCTTCG CCTGGTGCAG CTAAGGCCCT CGGCGGCCTG
CATCATTTCG TGACCACCGC GACAAATTTG CCAGCCTCGT TGATCCACCT CGTGTTTCTC
AGAGTGTCTC AAATCAACGG CTGCGCTCAT TGCATTGATC TTCACTCACG CGATCTGATC
AAAGCAGGTA TGTCAGTGGA CAAGGTGCTG TTAGTGCCGG TATGGCATGA AGCGCAATAT
TTGTTCTCGG ATCAGGAGCG CTCAGCACTG GCTTGGGCGG AAGAAGTCAC CAGGGTAAGC
GAGACACAGG TATCCGACGA AGCTTATGCA GCCGCATCGG CGATGTTTGC AGAAAAGGAT
CTTGTTGACC TGACAGCGGC GATTGCCGCA ATGAATGCGT TCAACCGTAT GGGCGTCAGC
TTCCGACTCA AACCTGCGGC TAGGGCTTGA
|
|---|
| Protein sequence | MNRLNWFEAS PGAAKALGGL HHFVTTATNL PASLIHLVFL RVSQINGCAH CIDLHSRDLI
KAGMSVDKVL LVPVWHEAQY LFSDQERSAL AWAEEVTRVS ETQVSDEAYA AASAMFAEKD
LVDLTAAIAA MNAFNRMGVS FRLKPAARA
|
|---|
| |