Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3097 |
Symbol | |
ID | 6112047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3432939 |
End bp | 3433508 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641622882 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001749956 |
Protein GI | 170722268 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.127725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAC CAACGATAGA TCACAGAGCC CAGATCCTGG CCACCGCCGA GAAACTCATC TACGAAAATG GGATTCATGC CACGGGCATG GACCTACTGG TGAAGACCTC TGGCGTGTCA AGGAAGGGTA TCTACAACCA CTTCGCTACC AAAGATGATG TCGCAGCTGC GGCCTTGAGC GCCCGTGACG TACGCTGGAT GCAATGGTTC AGGACTGAAT GCGACAAAGC CGCTACGCCG TACGATCGCA TACTGAGCAT GTTTACTGTT TTGAAGGGCT GGTTCGAGAC CGATGGTTTC CGCGGCTGTG CGTTCATTAA CACGGCAGGC GAGGTAGGGG ATCCCGATGA CCCCATCCGC CAGATCGCAA AGCTGCACAA GCAAAAGCTC TTAGACTATA CGTTTGAGCT GACTGAACAA TTGAACACCG ATCAACCGTT GGACTTAGCC AGGCAGTTAT TTATTTTGAT GGAAGGCGCA ATCACCACGG CTCGGGTTAT GGGTGATTAT CACGCTGCGG ATAATGCAAA GGAAGTTGCG CAGATGTTGC TGAAAGAGCT CGCGCCCTAA
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Protein sequence | MSRPTIDHRA QILATAEKLI YENGIHATGM DLLVKTSGVS RKGIYNHFAT KDDVAAAALS ARDVRWMQWF RTECDKAATP YDRILSMFTV LKGWFETDGF RGCAFINTAG EVGDPDDPIR QIAKLHKQKL LDYTFELTEQ LNTDQPLDLA RQLFILMEGA ITTARVMGDY HAADNAKEVA QMLLKELAP
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