Gene PputW619_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3059 
Symbol 
ID6112009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3397109 
End bp3398467 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content62% 
IMG OID641622844 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_001749918 
Protein GI170722230 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC ACGTAATGCC CCGTGCCCAG CAAATTGCCC AACGCGCATT CGCCAACTTC 
GAACGCTTTC TGCATATCGA GGCCGTGAGC GGCGTCGTAC TGTTGATCGC CGCCGTTGCA
GCACTGATCT GGGCGAATTC GCCCGCTGCC GAAAGCTATG ACGCCCTCTG GCACACGCCG
ATAAGCTTTG GTATCGGCTC CCTGGTCTAT TCCCAGTCAC TGCATTTCTG GATCAACGAC
GGCCTGATGA CCATCTTCTT CCTGGTCGTC GGTATGGAGA TCCGTCGCGA AATCCATGAA
GGCGCGCTGT CCAGCCTGCG CCAAGCCACG CTGCCGATGG CGGCAGCTGT CGGTGGTGTG
GTGGTACCCG CACTCATCTA CCTGGCGTTC AATCATTCGC CTCCCGCGCA AGAGGGGTGG
GCAGTGCCCA CCGCCACCGA CATCGCCTTT GCAGTGGGTG TGCTGGCGCT GCTGGGCAAG
TCGATCCCTT CCAATGTGCG GGTGTTCCTG CTCGCCCTGG CGATCATTGA CGACATCATC
GCCGTACTGA TCATTGCCTT TTTCTACTCC GGTGGCCTGG ATTACAGCGG TTTCGGCGTC
GCCGCCATCG GCCTGCTGCT GGTGCTCGGC CTGCAAAAGA TCGGTGTCGG TTCGGCCTAT
GCCTACATCA TCCCCGGGTT CATCACCTGG CTGGGCATGT TGATGACCGG TGCCCACCCC
ACCTTGGCGG GCGTGGTACT TGGCCTGATG ACGCCGGTCA GGGCCATGCC CTTGGGCGAG
CGCCCGCTGG AGGCTGTTAC CCGCTTCACC GACGACCTGC TCGGTCGCGC CAAGGCACCG
CAGATCGATG ACAGCGAACT GATGAGCCCG CTGAAAAACC TGCGTGTGGC GCAGCGTGAA
CTGGTAGCCC CCGTGCTGCG CGTGCAAGGC CATCTGCACC CTTGGGTGGC GTTCGCGATC
ATGCCGCTGT TCGCCCTGGC CAACGCCGGT GTCGGGTTGT CTGGTGTAGA CCTGTCTGCC
GATGGCCCTC ACTGGGTGAT GACTGGTGTG GCTGTGGCGC TGGTCTTGGG CAAGCCGTTG
GGTATCGTGA CGATCAGCTG GCTGATGGTA CGTTTGGGCT GGTGTGCGCT GCCGGCGGGC
GTTACCTGGC ACGGCATCAC GCTGATCGGG CTGTTGGCGG GCATCGGCTT TACCATGTCG
ATCTTCATTG CCAACCTGGC GTTCTCTGAC CCTGGCGTCC TGGGCGCGGC GAAGCTTGGC
GTACTGTCGG GCTCGGTCAT TGCTGCTGTG ATCGGCCTGA CTTGGGGTGT GTGGAGCCTG
CGCAAGGCAG CCAAGGCTGC ACCGGCCCAA GTTGGCTGA
 
Protein sequence
MQKHVMPRAQ QIAQRAFANF ERFLHIEAVS GVVLLIAAVA ALIWANSPAA ESYDALWHTP 
ISFGIGSLVY SQSLHFWIND GLMTIFFLVV GMEIRREIHE GALSSLRQAT LPMAAAVGGV
VVPALIYLAF NHSPPAQEGW AVPTATDIAF AVGVLALLGK SIPSNVRVFL LALAIIDDII
AVLIIAFFYS GGLDYSGFGV AAIGLLLVLG LQKIGVGSAY AYIIPGFITW LGMLMTGAHP
TLAGVVLGLM TPVRAMPLGE RPLEAVTRFT DDLLGRAKAP QIDDSELMSP LKNLRVAQRE
LVAPVLRVQG HLHPWVAFAI MPLFALANAG VGLSGVDLSA DGPHWVMTGV AVALVLGKPL
GIVTISWLMV RLGWCALPAG VTWHGITLIG LLAGIGFTMS IFIANLAFSD PGVLGAAKLG
VLSGSVIAAV IGLTWGVWSL RKAAKAAPAQ VG