| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3057 |
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| Symbol | |
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| ID | 6112007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3395794 |
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| End bp | 3396342 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622842 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001749916 |
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| Protein GI | 170722228 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTCAC CTTTGCCCCC TTTTGACTTT CAGCGTTGCC TTGAAGCCTG CGCACGGGGA
GACCGCCGAG CGCTGCATGC ACTCTATGAG GAGGAGGGCG CACGCCTGCT AGGCGTGGTG
CGCCGTATCG CCCGCGACCA CGCTACAGCA GAAGACATCC TGCACGATGC CTTCATTCGG
ATATGGTCCG GGGCTGCCAG CTTCGACCCT GCACGCGGCT CTGCGCGGGG CTGGATCTAT
AGCGTGACCC GGCACCTGGC GCTCAACTAC ATACGCGACT CCCGGCGCGA AGTCGTGCTG
GATGAAGGGG CGTTTGACAG TGCACAAGTA CCGCTGCCCT ATGCGAGTGA TATGGATCTC
ATGGCGGACT CGGCCAAGGT TCACCGTTGC CTCGAGCAAC TGGAACCCTC ACGCAAGCTG
TGCATCCTGC ACGCGTATGT CGACGGTTGC AGCCATGCCG AAATCGCCGG GTTGCTGAAC
ACGCCGTTGG GTACCGTCAA AGCCTGGATC AAACGCAGCC TGAAGGCGTT GCGGGAGTGC
ATGGGATGA
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| Protein sequence | MNSPLPPFDF QRCLEACARG DRRALHALYE EEGARLLGVV RRIARDHATA EDILHDAFIR
IWSGAASFDP ARGSARGWIY SVTRHLALNY IRDSRREVVL DEGAFDSAQV PLPYASDMDL
MADSAKVHRC LEQLEPSRKL CILHAYVDGC SHAEIAGLLN TPLGTVKAWI KRSLKALREC
MG
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