| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3055 |
|---|
| Symbol | |
|---|
| ID | 6112005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3393640 |
|---|
| End bp | 3394998 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641622840 |
|---|
| Product | hydroxydechloroatrazine ethylaminohydrolase |
|---|
| Protein accession | YP_001749914 |
|---|
| Protein GI | 170722226 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAGA CTTTGCTGAT AAAGAACGCC GAACTGCTGG TGACGATGGA CGGCGAGCGC
CGCGAGATCA GACGCGGCGG CCTGTTCATA GAAGACAACC TGATCAAGCA GGTTGGCCCC
AGCGACGAGC TGCCCCAGCA CGCCGACGAG ATTCTGGACA TGACCGGCAA GGTGGTCATC
CCGGGGCTGG TCAACACCCA CCATCACATG TATCAAAGCC TCACCCGCGT GGTCCCGGCG
GCCCAGGACG GTGAGCTGTT CAACTGGCTG ACCAACCTTT ACCCGATCTG GGCACGGTTG
ACGCCCGAAA TGATCGCGGT ATCGACGCAG ACCGCGATGG CCGAACTGAT TCTCTCCGGC
TGCACCACCT CCAGCGACCA CCTGTACATC TACCCCAATG GCTGCAAGCT CGACGACAGC
ATCCACGCCG CCGGGGAAAT CGGCATGCGT TTCCATGCCG CACGCGGCAG CATGAGCGTA
GGGCGCAGCC AAGGCGGGCT GCCGCCAGAC TCGGTGGTGG AAAAGGAAAG CGACATACTC
AAGGAGTCGC AGCGCCTGAT CGAGGACTAC CACGACGCCA GCCATGGCTC GATGCTGCGC
GTGGTCGTGG CGCCCTGCTC GCCGTTCTCG GTCAGCCGCG ACCTGATGCG TGAAGCGGCG
GTGCTGGCAC GCAATTACGG GGTTTCGCTG CACACCCACT TGGCTGAAAA CGTCAACGAT
ATCGCTTACA GCCGCGAAAA GTTCGGCATG ACACCTGCCG AATACGCCGA GGACCTGGGC
TGGGTCGGCC ACGATGTGTG GCACGCGCAC TGCGTGCAAC TCGACCAGCA CGGCATCGAG
CTGTTCGCCC GTACCGGCAC CGGTGTGGCC CACTGCCCGT GCTCGAACAT GCGCCTGGCT
TCGGGTATTG CACCGATCCG CAAGATGCGC GACCACGGGG TGCCCGTGGG CCTGGGCGTC
GATGGCTCGG CCTCCAACGA TGGCGCCAGC ATGATCGGTG AAGTGCGCCA GGCGCTGCTG
CTGCAGCGTG TCGGCTTCGG CCCCGACGCG ATGACCGCAC GCGAAGCGCT GGAAATCGCC
ACCCTCGGCG GTGCCAAGGT GCTCAACCGT AATGACATCG GCGCCTTGGC GCCGGGCATG
GTCGCCGACT TCGTCGCCTT CGACCTCGGC CATGTCGCCT ACGCAGGCGC CCACCACGAC
CCGCTTGCGG CCTTGGTGTT CTGCACCCCG ACCCAGGTCG ACACCAGCGT GATAAACGGC
CGCGTAGTGG TAAAGGACGG CCGCATCACC ACAGTCGACC TGCCGCTGGT GCTGGAGCGC
CACAATCAGC TGGCCCGTCA GCTGGTGACC GGCGATTGA
|
|---|
| Protein sequence | MPKTLLIKNA ELLVTMDGER REIRRGGLFI EDNLIKQVGP SDELPQHADE ILDMTGKVVI
PGLVNTHHHM YQSLTRVVPA AQDGELFNWL TNLYPIWARL TPEMIAVSTQ TAMAELILSG
CTTSSDHLYI YPNGCKLDDS IHAAGEIGMR FHAARGSMSV GRSQGGLPPD SVVEKESDIL
KESQRLIEDY HDASHGSMLR VVVAPCSPFS VSRDLMREAA VLARNYGVSL HTHLAENVND
IAYSREKFGM TPAEYAEDLG WVGHDVWHAH CVQLDQHGIE LFARTGTGVA HCPCSNMRLA
SGIAPIRKMR DHGVPVGLGV DGSASNDGAS MIGEVRQALL LQRVGFGPDA MTAREALEIA
TLGGAKVLNR NDIGALAPGM VADFVAFDLG HVAYAGAHHD PLAALVFCTP TQVDTSVING
RVVVKDGRIT TVDLPLVLER HNQLARQLVT GD
|
|---|
| |