Gene PputW619_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3049 
Symbol 
ID6111999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3386501 
End bp3387319 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID641622834 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001749908 
Protein GI170722220 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.100849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG TCCGCTCTGC ACTGTTCGTA CCCGGCAGCC GGCCTGAGCG TTTCGCCAAG 
GCGCTGGCAG CGGGGGCCGA TGCCGTCATC GTCGATTTCG AGGATGCCGT GGAGGAACCT
CTCAAGCGCC AGGCCCGGGA CAACCTGGGG GCTTTCCTGC AGGCCACGCC ACTGGCGTCG
GTGTGGGTCC GTGTGAACGC GCCGCAGCAC GCCGAGCATG CTGCAGACCT GGCTTTCTGC
GCGCAGCAGC CTGGTATCGC CGGCGTGCTG CTGCCCAAGG TGGAAAACGC CGCCCAAGTG
GCCGTTGCCC GGCACATCGG CAAACCGGTC TGGCCCATCA TCGAAAGCGC CAAAGGCCTG
CTGGCGCTCG AGCAGATCGC CCATGCCGAG GGGGTCGAGC GGTTGTCGTT CGGCAGCCTC
GACTTGGCGC TGGACCTTCA TCTGAACACC GACAGCGATG CTGCCCGGCA GTTTCTTGAC
CAGGCGCGCA TGGCCGTGCA GCTACACTCG CGGGGTGCCG ACCTGCTGCC GCCGCTCGAT
GGCGTGTTTC CTGCCATTGG CGACACCGAA GGTTTGCACC AGGCGGTACG GCATGCCTGC
GACTTGGGGT ATGGCGGGGC GTTGTGCATT CACCCCAGGC AAGTGCCGGT GATTCACGCG
GCACTCGCGC CCGACGCCGA AGCGCTGGCC TGGGCCCGAC GGGTGCTGGC GGCGAGCGCC
GCAGCTAACG GGGCCGGTGC GTTTCAGCTG GACGGGCAAA TGGTGGATGC GCCGGTGGTG
TTGCGGGCGC GACGGTTGTT GGCACAGGCG TCCGGTTGA
 
Protein sequence
MNSVRSALFV PGSRPERFAK ALAAGADAVI VDFEDAVEEP LKRQARDNLG AFLQATPLAS 
VWVRVNAPQH AEHAADLAFC AQQPGIAGVL LPKVENAAQV AVARHIGKPV WPIIESAKGL
LALEQIAHAE GVERLSFGSL DLALDLHLNT DSDAARQFLD QARMAVQLHS RGADLLPPLD
GVFPAIGDTE GLHQAVRHAC DLGYGGALCI HPRQVPVIHA ALAPDAEALA WARRVLAASA
AANGAGAFQL DGQMVDAPVV LRARRLLAQA SG