Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3019 |
Symbol | |
ID | 6111970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3360660 |
End bp | 3361322 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641622806 |
Product | two component transcriptional regulator |
Protein accession | YP_001749880 |
Protein GI | 170722192 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.933394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGC TACTGGTTGA GGATGATACC GCTCTGGGGG AGGGGATCTG CGACGGGTTG CGCCAGGAGG GCTATACCCT CGACTGGTTG CGCGATGGCC TGAGCGGGCT GCATGCCCTG CAACACGAAA TGTTCGACCT GGTGATCCTC GACCTCGGGC TGCCGCGGTT GGGTGGCATC GAGCTGCTGC GACGGCTGAG GGCAGGGGGC GACAGCCTAC CGGTTCTGAT CCTTACCGCG CGCGATGCAA CCGAAGACCG TATCACTGGC CTGGATGCTG GCGCCGACGA TTACCTGGTC AAGCCTTTCG ACCTCAACGA ACTCAAGGCC CGCCTGCGCG CCTTGCTCAG GCGCAGCGCC GGGCGGGCCA AGGTGCTCAT CGAGCACGCA GGCGTAAGCC TTGACCCTGC CACTCAGCAG GTGCACTACA ACGGTGTGCC CGTGGTACTG ACGCCCAAGG AGTACCGGCT GCTGCACGAG TTGCTGGCGC AACCGGGCAA GGTATTCACC CGTGAGCGGC TGACCCAACT GCTGTATGGC TGGGACGAGG AACCTGAGAG CAACACGCTG GAAGTGAACA TCTATCACTT GCGCAAGAAG CTGTTCAACG GCCTGATCCG CACGGTGCGC GGTATCGGTT ACCTGGTCGA GGGCAAGGTA TGA
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Protein sequence | MRLLLVEDDT ALGEGICDGL RQEGYTLDWL RDGLSGLHAL QHEMFDLVIL DLGLPRLGGI ELLRRLRAGG DSLPVLILTA RDATEDRITG LDAGADDYLV KPFDLNELKA RLRALLRRSA GRAKVLIEHA GVSLDPATQQ VHYNGVPVVL TPKEYRLLHE LLAQPGKVFT RERLTQLLYG WDEEPESNTL EVNIYHLRKK LFNGLIRTVR GIGYLVEGKV
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