Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3013 |
Symbol | |
ID | 6111964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3355456 |
End bp | 3356235 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622800 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_001749874 |
Protein GI | 170722186 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGT CCATCCGCCA CGACACCACC TACAGCTATG CCAGTGACGT ATGCAACAGC ATCCAGTTCC TGCGCCTGAC ACCGCGCAGC AGTGAGCGCC AGCGCATCCT CGAATGGCAA CTGGACCTGC CCTGCAAGGT GAACAGCCAG ATCGACCCGT ACGGCAATAT CCTGCACGTA CTGACCCTGG ACAAACCCCA TGGCCACCTC GCCCTTACCG CCAGTGGCCA GGTGGAAATC GACCCGGATT GCGAACACGA GGCCGGCGGC CAGTCGCCCC TGCCCTTCCT GCGCAGCAGC CACCTCACCC AGGCCAGTGA CGCACTCAAG GCCTTCGCCG CCCAGCAGTG CGGCGAGCGT CGCGACCGGG GCGCGCTGAC CGCACTCATG CAAGGCCTGG CCGACCATAT GCCCTACAGC CCGGGTGCTA CCTGCGTGGA CACCACTGCG AGTGAGTCAT TTGCCGGCGG TGCCGGAGTG TGCCAGGACC ATACCCACGC GTTCCTCGCC TGCGCCCGCA GCCTCGGCAT CCCGGCACGT TACGTGTCGG GCTACCTGTG TACCGAAGAC GAAACCCACC TGGCCAGCCA CGCCTGGGCC GAAGCCTGGA TCGATGAAGC CTGGTACAGC TTCGACGTCA CCAACCGCCT CACCCGGCCC GAACGGCATC TGAAGCTGGC GGTAGGCCTG GATTACCTCG ACGCCTGCCC GGTCCGGGGC GTGCGCCGCG GTGGCGGCGT CGAATCCATG CAGGCAAGCG TCCACGTACA CCGCCAGTAA
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Protein sequence | MKLSIRHDTT YSYASDVCNS IQFLRLTPRS SERQRILEWQ LDLPCKVNSQ IDPYGNILHV LTLDKPHGHL ALTASGQVEI DPDCEHEAGG QSPLPFLRSS HLTQASDALK AFAAQQCGER RDRGALTALM QGLADHMPYS PGATCVDTTA SESFAGGAGV CQDHTHAFLA CARSLGIPAR YVSGYLCTED ETHLASHAWA EAWIDEAWYS FDVTNRLTRP ERHLKLAVGL DYLDACPVRG VRRGGGVESM QASVHVHRQ
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