| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2990 |
|---|
| Symbol | |
|---|
| ID | 6111941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3329694 |
|---|
| End bp | 3331235 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641622777 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001749851 |
|---|
| Protein GI | 170722163 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0926218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAT CCCCCTCGCA ACTGCGCCTT GAGCTGCGTG CCATTACCAA GCGATACCCG
GGCACCTTGG CCAACGACCG CATCGACCTG CGCATCGCTC CCGGTGAAAT CCACGCCCTG
CTCGGCGAGA ACGGCGCGGG CAAGAGCACC CTGATGAAGA TCATCTACGG CGTCACCGCG
CCGGATGCCG GCCAGGTGCT ATGGGAAGGC CAGCCCGTGC ACGTGCGCGA CCCCGCCCGG
GCCCGCGCGC TGGGCATCGG CATGGTGTTC CAGCACTTTT CCCTGTTCGA AACCCTGAGC
GTCGCGCAAA ACATTGCCCT GGCCCTTGGC CGCGATGCCG GCACGCCGAA GCAGCTGGCA
CCACGCATCC GCGAAGTGTC CCAACGCTAC GGCATGGGCC TGGAGCCGGA GCGCCTGGTG
CACAGCCTGT CGATCGGCGA ACGCCAGCGG GTGGAGATCG TGCGCTGCCT GATGCAGCCG
ATCAAGCTGC TGATCCTCGA TGAGCCGACC TCGGTGCTTA CCCCGCAAGA GGTCGACGAA
CTGTTCGTCA CCTTGCGCGC ACTCGCCGCA GAGGGCTGCA GCATCCTGTT CATCAGCCAC
AAGCTCAACG AAGTGCGTGC CCTGTGCCAT GGTGCCACGG TGTTGCGCGG CGGACGGGTT
TCCGGCGCTT GCAGCCCGGC GCAATGCAGC GATCTGCAGC TGGCGCGGAT GATGGTCGGC
GATGCCGAAG GGCTGGAGGC AAGCTACCCG AAAAGCGCCG GCGGCTTGCC ACGTCTGCGG
GTGGACGACC TGTCCTGGCG CAACAAGGAC CCGTTCGGCA CGTCCTTCGA ACACCTGCGC
CTGGAAGTGC GCAGCGGTGA GATCGTCGGC ATCGCGGGGG TGGCCGGCAA CGGCCAGGAC
GAACTGCTGG CCCTGCTCAG TGGTGAAACA CGCCTGCCCG CCGGCGAGCG CGAACGCATC
ACCCTCGACA ACCGGCCGAT GGCCCACCTG TACCCCGACG CCCGCCGCGC CCTGGGGGTG
GCATTCGTAC CGGCCGAGCG CCTTGGGCAC GGCGCGGTGC CGGACATGAG CCTGGCCGAC
AACGCCCTGC TCACCGCTTT CCAGCACGGC CTGGTCAACC GCGGCCTGAT CCGCTCCGGC
AAGGTGCAGG CGCTGGCCGA GCAGATCATC CAGCGCTTCG CGGTCAAGGC CCCGGATGCC
CGCGCCACGG CACGCAGCCT GTCCGGGGGC AACCTGCAGA AGTTCATCCT CGGCCGCGAA
ATCCTCCAGG CCCCCAAGCT GCTGGTCGCT GCCCACCCGA CGTGGGGCGT GGATGTCGGC
GCCGCCGCCG CGATTCACCG TGCGCTGATT GCCCTGCGCG ACGCCGGTGC GGCAATCCTG
GTGATCTCCG AAGACCTGGA AGAGCTGTTC CAGATCAGCG ACCGCATCGG CGCGCTGTGC
AGTGGCCGCC TGTCGCCGCT CAAGCCCACC GCACAGACCC ATACCGTGGA GGTCGGCGGC
TGGATGGCCG GCCAGTTCGA TGCCCCGCAA GACGCCGCCT GA
|
|---|
| Protein sequence | MSRSPSQLRL ELRAITKRYP GTLANDRIDL RIAPGEIHAL LGENGAGKST LMKIIYGVTA
PDAGQVLWEG QPVHVRDPAR ARALGIGMVF QHFSLFETLS VAQNIALALG RDAGTPKQLA
PRIREVSQRY GMGLEPERLV HSLSIGERQR VEIVRCLMQP IKLLILDEPT SVLTPQEVDE
LFVTLRALAA EGCSILFISH KLNEVRALCH GATVLRGGRV SGACSPAQCS DLQLARMMVG
DAEGLEASYP KSAGGLPRLR VDDLSWRNKD PFGTSFEHLR LEVRSGEIVG IAGVAGNGQD
ELLALLSGET RLPAGERERI TLDNRPMAHL YPDARRALGV AFVPAERLGH GAVPDMSLAD
NALLTAFQHG LVNRGLIRSG KVQALAEQII QRFAVKAPDA RATARSLSGG NLQKFILGRE
ILQAPKLLVA AHPTWGVDVG AAAAIHRALI ALRDAGAAIL VISEDLEELF QISDRIGALC
SGRLSPLKPT AQTHTVEVGG WMAGQFDAPQ DAA
|
|---|
| |