| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2988 |
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| Symbol | |
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| ID | 6111939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3326741 |
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| End bp | 3327682 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622775 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001749849 |
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| Protein GI | 170722161 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000213748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0196481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA GGTCGAAATG GGTTGCCCTG TGCCTGGCCC TTTCGGTGCC GTTTGCGGCG
GTGTGCAGCG TTGAAGCAGC GACCGACAAG CTGAGCCGGC TGCGCGACAG TCAGGTCCTC
AATCTGGGTT TTATCGCAGA CCTTGCCCCG TTTTCCTCAG GCAGTATCCA GTCACCTCAA
GGGTATGGCA TCGAATTGTG CCAGGCAGTG GCTCAACACC TTCGCCAGTC ACCTGGCCTT
GCCGACTTGC AAGTGCATTG GCATGTGGTG CCGCAGGAGC AAGCCGTCCG CGCCTTGAGC
GAGGGAACGG TTGATCTGCT GTGCACGCCG ATGGTGGAAA CGATCACAAG ACGGGAAACC
CTGAATTTTT CCATACCGGT ATTCACCACC GGCCTTGCGG TGCTGGTGCG GCGTGATGCA
CCGGCCAGCC TTCTGGAGCC ACTGCGTGGT AAGCCTGTCG ATACCGGCCC CAGGTGGCGC
GCAACCCTCA ATGCGGGGTT GAGCAAGCAC AGTTTTGCAG TGCTGCGCGG CACGCTGAGC
AGTCAGTGGG CGCGGGAGCG TATTCGCAAG CTTGGCCTGC AGTCCAGGCT TGAAGAGGTG
TCCAGCTACC AGGAGGGTGT GCGCCGGGTG GTCGAGCGCA AGGTCGATGC GTTTTTTGGC
GAGAGGATGA TTTTGCTTTC CCTGCAGAGC CAGCAGCCTG AGCGCGACCG GTTATGGATC
CCGGATCACC TGTTTGTCAC GAGCCGTGTC GCACTGCCCA TGGCCCGTGG CGATGATGGT
TTTCGCCTGT TGGTGGATGC CGCGCTTAGC CAGGCGCTGT CCGGCCCGGA TGGAGAAGCC
TTGTTCGTAC GCTACCTGGG GGTACAAACA GCGCAGGACA AACTGTTGCA GAGCCTTTAT
GTGTTGCCGG ATGACCGTGA ACGGCTGGCG CCGCAACATT AG
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| Protein sequence | MMRRSKWVAL CLALSVPFAA VCSVEAATDK LSRLRDSQVL NLGFIADLAP FSSGSIQSPQ
GYGIELCQAV AQHLRQSPGL ADLQVHWHVV PQEQAVRALS EGTVDLLCTP MVETITRRET
LNFSIPVFTT GLAVLVRRDA PASLLEPLRG KPVDTGPRWR ATLNAGLSKH SFAVLRGTLS
SQWARERIRK LGLQSRLEEV SSYQEGVRRV VERKVDAFFG ERMILLSLQS QQPERDRLWI
PDHLFVTSRV ALPMARGDDG FRLLVDAALS QALSGPDGEA LFVRYLGVQT AQDKLLQSLY
VLPDDRERLA PQH
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