Gene PputW619_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2980 
Symbol 
ID6111931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3318522 
End bp3319355 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content55% 
IMG OID641622767 
Producthypothetical protein 
Protein accessionYP_001749841 
Protein GI170722153 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0556793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTT CTCGCCGTAC TGCCTTCTAT GCGAGCAACC TGGGCATACC GCTGTTGCTG 
GCCGTGATCG TCTTCCTGCT ATTCGATATA ACTCACCTGG ACCAACAGAT CAGTAATTTG
CTGCTCGATC CAGCGACCGG CCAATTCCCA TTGCTGCACA ACCAATGGTT CGAAAAAGCA
ACCCACAAGC TGCCACGCGT TCTGCCGAAC TGGACAGGGG AACTGGCGAT TATTGGCAGC
CTGCTTTCCT TTGTCTGGCC GCTGAGCGCG AAGTTTCCTC ACCTGGTCTC AAGCCGGCTT
TTTCAAGCAA CCCGCATCGG GACTGCTTTG CGATTTACCA CACGTTATCG CAGAGACTTT
TTCTATGTTG TGGTGACGTT CGCGGCATGC ACTGGAGTGA TCCACTACCT TAAGAGCCAC
ACCGGCATCT ACTGTCCAGT GGAGACAACT CTTTACGGCG GAGCAGCACC CCATAAGGAG
TGGTTCACCC ACTTCAATTG GCTGGATAAG GCCCCCGCTG GCCGGTGCTG GCCGGGCGGC
CATGCCTCCA GTGCCTTTAC GTTGTTGGCC GTTTATTTCG TGGCCCTCCG ACACCGATGG
CCGCATACAC GCAAACTCCT GGTAGTCATC CTCTCGCTCG GCTTCGTGTA CGGCACCACC
CGTGTATTGC AAGGCTGGCA CTATATGTCA CATACCTTCT GGGCCGGGAT TTTCGTCTGG
CTAACTGCCT GGACGAGCGC ATTGTTGTTT TACGGACGTC CCGCGTTGCA GATCGCACCC
CAGGAAATTG AAAGCCAGGC ATCGATGGTC GTCATCGATG CTACTCAACC CTGA
 
Protein sequence
MQLSRRTAFY ASNLGIPLLL AVIVFLLFDI THLDQQISNL LLDPATGQFP LLHNQWFEKA 
THKLPRVLPN WTGELAIIGS LLSFVWPLSA KFPHLVSSRL FQATRIGTAL RFTTRYRRDF
FYVVVTFAAC TGVIHYLKSH TGIYCPVETT LYGGAAPHKE WFTHFNWLDK APAGRCWPGG
HASSAFTLLA VYFVALRHRW PHTRKLLVVI LSLGFVYGTT RVLQGWHYMS HTFWAGIFVW
LTAWTSALLF YGRPALQIAP QEIESQASMV VIDATQP