| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2965 |
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| Symbol | |
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| ID | 6111916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3292715 |
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| End bp | 3294388 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641622752 |
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| Product | general substrate transporter |
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| Protein accession | YP_001749826 |
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| Protein GI | 170722138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.338503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.578343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTC TCGACAGCGC ATCCACGGGC AGTAGCGCGC CCCAACGCGG CATCACCAAA
GAAGAGCGCA AGGTCATCTT CGCGTCCTCC CTGGGTACCG TGTTCGAATG GTACGACTTC
TACCTCTACG GCTCACTGGC GGCGATCATC GCCAAGCACT TCTTTGCCGG GGTCAATGAA
ACCACATCCT TCATTTTCGC CTTGCTTGCC TTTGCCGCTG GCTTTGCGGT GCGACCGTTC
GGTGCCATCG TGTTCGGCCG CCTGGGCGAC ATGATCGGGC GCAAACACAC GTTTCTGATC
ACCATCGTCA TCATGGGCCT GTCTACCGCG ATCGTCGGGC TGCTGCCCAG CTACGCAACG
ATCGGTGTGG CAGCCCCGAT CATTCTGATT GCCCTGCGCC TGTTGCAGGG CCTGGCGCTG
GGTGGCGAGT ACGGTGGGGC GGCCACTTAT GTGGCCGAGC ATGCCCCCAA AGGCCGGCGT
GGTTTCTTCA CCTCGTGGAT CCAGACCACT GCGACGCTGG GCCTGTTCCT GTCGTTGCTG
GTGATCCTGG CCTGCCGCAC GGCCTTGGGT ACTGAAGCAT TCGAAGCCTG GGGCTGGCGC
ATCCCGTTCC TGCTGTCGAT CCTGCTGCTG GCGATTTCGG TGTACATCCG CATGCAGCTC
AATGAGTCGC CGGTGTTCAT GAAGATGAAG GCCGAAGGCA AAGCCTCGAA AGCCCCGCTG
ACCGAATCCT TTGCACGTTG GGACAACCTC AAGGTGGTGA TCATGTCACT GCTCGGCGGC
ACTGCCGGCC AGGCCGTGGT GTGGTACACG GGGCAGTTCT ATGCGCTGTT CTTCCTCCTT
CAGACGCTGA AGATCGACCC ACAGACGGCC AACCTGCTGA TCGCCGGCTC GTTGCTGATC
GGTACGCCGT TCTTCATCTT CTTCGGCAGC CTGTCCGACC GCATCGGGCG CAAGAAAATC
ATCATGGCAG GCTGCATCAT TGCCGCCTTG ACCTACTTCC CGATCTTCAA AGCGTTGACC
GAATACGGCA ATCCTGACGT CTTCGTTGCC CAGGAGCAGA ACCCGGTGGT GGTCATGGCC
GACCCTGACC AATGCGCATT CCAGTTCGAC CCGGTGGGCA AGGCCAAATT CACCAGCTCG
TGCGACATTG CCAAAAGCCT GCTGGCCAAG CGGGCGATCC CGTACCAGAA CGAAACGGCC
GAGCCTGGCA GCGTGGCGCA GATTCGTATC GGTGAGCGGG TGATCCCGAG CTTCGATGGC
AGCAGCCTGG CTGCGGCTGA CCTGAAGACC CAAGGCGACG CCTTTACCGC AACCCTGGCG
GGTGCCTTGA AGGAGGCGGG TTACCCCGAG AAGGCCGACC CTGCGAAGAT CCACTACCCG
ATGGTGCTGT TGCTACTGAC CATTTTGGTG ATCTACGTGA CCATGGTATA TGGGCCGATA
GCGGCATGGC TGGTGGAGCT GTTCCCGGCA CGTATCCGCT ATACCTCGAT GTCGCTGCCA
TACCATATCG GCAACGGCTG GTTCGGCGGC TTCCTGCCTA CCGTGGCATT TGCCATGGTG
GTGGCCACCG GTGATATCTA CTACGGGCTG TGGTACCCGA TCGTGATCGC GGTGATGACA
GCGGTGCTGG GGATCTTCTT CCTGCCAGAG ACCAAGGACC GGGATATCAC TTGA
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| Protein sequence | MAVLDSASTG SSAPQRGITK EERKVIFASS LGTVFEWYDF YLYGSLAAII AKHFFAGVNE
TTSFIFALLA FAAGFAVRPF GAIVFGRLGD MIGRKHTFLI TIVIMGLSTA IVGLLPSYAT
IGVAAPIILI ALRLLQGLAL GGEYGGAATY VAEHAPKGRR GFFTSWIQTT ATLGLFLSLL
VILACRTALG TEAFEAWGWR IPFLLSILLL AISVYIRMQL NESPVFMKMK AEGKASKAPL
TESFARWDNL KVVIMSLLGG TAGQAVVWYT GQFYALFFLL QTLKIDPQTA NLLIAGSLLI
GTPFFIFFGS LSDRIGRKKI IMAGCIIAAL TYFPIFKALT EYGNPDVFVA QEQNPVVVMA
DPDQCAFQFD PVGKAKFTSS CDIAKSLLAK RAIPYQNETA EPGSVAQIRI GERVIPSFDG
SSLAAADLKT QGDAFTATLA GALKEAGYPE KADPAKIHYP MVLLLLTILV IYVTMVYGPI
AAWLVELFPA RIRYTSMSLP YHIGNGWFGG FLPTVAFAMV VATGDIYYGL WYPIVIAVMT
AVLGIFFLPE TKDRDIT
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