Gene PputW619_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2960 
Symbol 
ID6111911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3288750 
End bp3290069 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content66% 
IMG OID641622747 
ProductPNDR family (class II) oxidoreductase 
Protein accessionYP_001749821 
Protein GI170722133 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.184613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.426235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGA ACACTATTGA AATCGACACC CTCGTCGTCG GCGCCGGCCA GGCCGGCGTG 
GCCATGAGCG AACACTTGAG CAAGCTCGGC GTGCCGCACC TGGTGCTGGA GCGCAAGCGT
ATCGCCGAGG CCTGGCGCAC TGGCCGCTGG GATTCGCTGG TCGCCAATGG CCCGGTCTGG
CATGACCGCT TCCCCGGCCT TGAATTCAAC CTGGACCCCG ACGCCTTCGC CGGCAAGGAC
CAGGTTGCTG ACTACTTCGA GCAATACGTG CGCAAGTACA ACCTGCCGGT GCGCACCGGC
ATCGAGGTGA GGAAGGTGGT GCGCAATGCC GACCGCCCAG GCTTCACCAT CGAGACCAAT
GAGGGGGTGA TTCGGGCCAA CCGCGTGGTG GCCGCCACCG GCCCGTTCCA GCGTCCGGTC
ATCCCGGCCA TCGCGCCAAA GGATGAGCAC CTGCACCAGA TCCACTCTGC CGCCTATTTC
AACCCCGGGC AGCTGCCTGA AGGCGCAGTG CTGGTGGTAG GTGCCGGCTC TTCCGGCGTG
CAGATCGCCG AAGAGCTGAT GCGCGCCGGG CGCCAGGTGT ACCTGTCGGT CGGCGCCCAC
GATCGTCCGC CACGGGCTTA TCGCAACCGC GACTTCTGCT GGTGGCTGGG CGTGCTGGGC
GAATGGGATG CCGAGATCGC CAAGCCAGGC CGCGAGCACG TGACCATTGC CGTCAGCGGT
GCCCGTGGCG GCCACACCGT AGACTTCCGC GCCCTCGCCC ATCAGGGCAT GACCCTGGTC
GGCCTGACCC AGTCGTTCGA CAACGGTGTG GCACGCTTCC AGGACAACCT GGCCGACAAC
ATCCGCCGTG GCGACGAAAA CTACCTGGCC CTGCTGGACG CTGCAGATGC CTATATCGAA
CGCAACGGCC TGGACCTGCC GCAAGAGCCA GAAGCACGCA AGCGCCTGCC GGACCCGGCT
TGCGTCAGCA ACCCGCTACT GGAATTGGAC CTGGCTAAGG CCAATGTCAC CAGCATCATC
TGGGCCACCG GCTACGGCGT GGACTTCAGC TGGCTGCAGG TCGACACCTT CGATGCCAAC
GGCAAACCCC AGCACCAGCG CGGCGTGTCC CGCGAGCCGG GTGTGTACTT CCTCGGCCTG
CCCTGGCTGT CGCGCCGCGG TTCGTCGTTC ATCTGGGGCG TTTGGCACGA CGCCAAGCAC
GTCGCCGGCC ACATCGCCAC CCAGCGCACT TACCTGGCCT ACCGCGACCG CGAACAGCGT
GAAGCGGATG AGCAGCAACC TACCTCGATC AGCAACGTCA GCACCCTCGG AGCCCACTGA
 
Protein sequence
MTLNTIEIDT LVVGAGQAGV AMSEHLSKLG VPHLVLERKR IAEAWRTGRW DSLVANGPVW 
HDRFPGLEFN LDPDAFAGKD QVADYFEQYV RKYNLPVRTG IEVRKVVRNA DRPGFTIETN
EGVIRANRVV AATGPFQRPV IPAIAPKDEH LHQIHSAAYF NPGQLPEGAV LVVGAGSSGV
QIAEELMRAG RQVYLSVGAH DRPPRAYRNR DFCWWLGVLG EWDAEIAKPG REHVTIAVSG
ARGGHTVDFR ALAHQGMTLV GLTQSFDNGV ARFQDNLADN IRRGDENYLA LLDAADAYIE
RNGLDLPQEP EARKRLPDPA CVSNPLLELD LAKANVTSII WATGYGVDFS WLQVDTFDAN
GKPQHQRGVS REPGVYFLGL PWLSRRGSSF IWGVWHDAKH VAGHIATQRT YLAYRDREQR
EADEQQPTSI SNVSTLGAH