| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2957 |
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| Symbol | |
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| ID | 6111908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3285320 |
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| End bp | 3286588 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622744 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001749818 |
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| Protein GI | 170722130 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.107858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.40455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCG CTATTCGCAT CACCTCCCCC CTTCTGCTGG CCCTGGCCAG CACCACCGTC
CTGGCCGACG GCGACCTCAT GACCCGCAGC ACCATGACCG GTGACTGGGG CGGCCTGCGC
CACCAGCTTG AAGAAGACGG CATCAAAGTC ACTGGCGACT ACAGCGGTGA GACCGCGTAC
AACGCCCACG GTGGCCTGCA CCGCTCGGCG CGCTATTCGC AGAACCTCAA GTTCGGTGTG
CAGTTCGACC TGTCGAAACT GTATGGCCTG GATAACGGCG GCAAGGTCCA GCTGACCATC
AACGACCGTC GCGGCAACAG CGCCTCGGAA GACCTGGTGG GCAACCGCCT GCCGATCCAG
GAAAACTACG GCGGCCTGTA CACCCGCCTG ACCGAACTGA GCTACGAACG CACCCTGTTC
ACCCCGGCGC TCAACGTCAA GCTCGGCTAC ATGGCCATGG GCAACGACCT CGGCGGCCTG
GACAGCGGCA TCCTGTGCAA CTTCATGAAC GCCGGCTTCT GCGGGCACCC GCTGAACATG
TCGGGTGGCA GCGGTTGGAC CAACTACCCC AACGCCCACC TGGGCGTGCG CGTGAAGTAC
GACCTGTCGC CGTCGTGGCA GTTGCGCGTG GCGGCGTTCA ACGTCGACCC GGAAAGCAAC
GGCAACTCCA GCCGCGCCTG GCACCTGGGG CCCAAGCACA CCACCGGCAC CGTGGTGCCG
GTCGAGCTGG TGTACAAGCT GCAGGGTGAA CTGCCAGGTG AATACAAGCT GGGCTACTAC
TACGATAGCT CCGACGTCAA ACGCATTGGA AGCGACGACG AAGTGTCCGG CCGTGGCGGC
CATTACCTGC TGATCGACCA GGCGGTGTGG AACGATGCCG GTTTGCCAGG CCGTAGCCTG
CATGCCTTCG GCCAGTACTC GGCGTCGAGC AAGGCAGCCT CGCCATTTAC CAAGTGGTAT
GGCGCCGGTG TGGTGCTGTA CAAGCCGTTC GAAGGCCGCC CGCGTGACAC CGTGGCGCTG
GGTTATGGCC GCGCCGTGCC GAATCCGCGC AGCCGTGACG TGCTGGAAGA TGCCGCGTTC
AATGCCGGGC AGCAGTTCCC GGACATCGAC AGCGCCGAGC AATTGATCGA GCTGAGCTAT
GGCTACCAGG CGACGCCATG GCTGAACCTG CGCCCGGATG TGCAATACAT CATCGAGCCT
GGTGCCTTCT CCGGGCAGGA CATCGACAAC GCGCTGGTGG TTGGGCTGCA GGTCAAAGCG
ACCTTCTGA
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| Protein sequence | MPSAIRITSP LLLALASTTV LADGDLMTRS TMTGDWGGLR HQLEEDGIKV TGDYSGETAY
NAHGGLHRSA RYSQNLKFGV QFDLSKLYGL DNGGKVQLTI NDRRGNSASE DLVGNRLPIQ
ENYGGLYTRL TELSYERTLF TPALNVKLGY MAMGNDLGGL DSGILCNFMN AGFCGHPLNM
SGGSGWTNYP NAHLGVRVKY DLSPSWQLRV AAFNVDPESN GNSSRAWHLG PKHTTGTVVP
VELVYKLQGE LPGEYKLGYY YDSSDVKRIG SDDEVSGRGG HYLLIDQAVW NDAGLPGRSL
HAFGQYSASS KAASPFTKWY GAGVVLYKPF EGRPRDTVAL GYGRAVPNPR SRDVLEDAAF
NAGQQFPDID SAEQLIELSY GYQATPWLNL RPDVQYIIEP GAFSGQDIDN ALVVGLQVKA
TF
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