| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2932 |
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| Symbol | nfrB |
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| ID | 6111883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3246785 |
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| End bp | 3248959 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622719 |
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| Product | bacteriophage N4 adsorption protein B |
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| Protein accession | YP_001749793 |
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| Protein GI | 170722105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.748397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.174215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGG CTTTCATCGA TTTTCTTACC TACGTACTGT TTGGCCTCAA GATCCTGGCG
ATCATCCTCG CCGCACTGAT GTTCCTGCTC GGCCTGGACG ACCTGTTCAT CGACCTGTGC
TACTGGTGCC GCAAGCTTTT CCGTCATTTG CGTATCTATG ACAAGTACGC CAGGGCCGAC
GAGAAGCGGC TGTTCGAGGT GCCGGAAAAA CCCCTGGCGA TCATGGTCCC GGCCTGGAAC
GAAGTGGGCG TGGTGGGAGA AATGGCGCGC CTGGCGGCCT CGACCATCGA CTACGAGAAC
TACCAGATCT TTGTCGGCAC CTACCCCAAC GACCCACAAA CCCAGGCCGA CGTCGATGCC
GTGTGCCTGC ACTACCCCAA CGTGCACAAG GTGGTCTGCG CCCGCCCCGG CCCCACCAGC
AAGGCTGACT GTCTGAACAA CATCATCGAT GCCATTCTGC GCTTCCAGGA CGACGCACGC
ATCGAGTTCG CAGGCTTCAT CCTGCATGAC GCCGAGGACG TGATCTCGCC CATGGAGCTG
CGGCTGTTCA ACTACCTGCT GCCCGCCAAG GACATGATCC AGATCCCGGT GTACCCATAC
GCGCCGCAAT GGAAGGGCTT TACCGCCGGA CACTACGTAG ACGAGTTCGC CGAAAACCAC
GGCAAGGACG TCATTGTCCG CGAGGCGCTT ACCGGCCAGG TGCCCAGTGC CGGTGTCGGC
ACCTGTTTCA GCCGCCGCGC CATCAGCGCC CTGCTCGAAG ACGGTGACGG TATCGCCTTC
GACGTGCAGA GCCTGACCGA GGATTACGAC ATCGGCTTTC GCCTGAAGCA AAAAGGCATG
AAGTGCATCT TTGCCCGCTA CTCGGTCACC GACCCTGCGC TGGCCCTCAA GCACGAATGG
CGCCCCGGCA TGAGCCGCGA GTTCGCCCAA GTGATCTGCG TGCGCGAGCA CTTCCCGCGT
GACTGGCAGC ATGCCATTCG GCAAAAGTCT CGTTGGATCG TCGGCATCGT GTTCCAGGGC
ACCAGCAACC TGGGCTGGAG CCGAACAGGC GCGCTCAACT ACTTCCTTTG GCGGGACCGC
CGGGGCTTGT TCGCCTACCT GCTGGGCTTT TTGGTCAACC TGTTGCTGCT GGTGCTGCTG
GCCATGTGGC TGGTTACGGT GATTGCGCCG CAGTCCTGGC GCTTCATGTC AATCCTCAGC
GACAGCCAGC TCCTGACCAC ACTGCTCTGG CTCAACGGCC TGATGCTGAT CAACCGCCTG
TTCCAGCGCG GCTGGTTCGT CACCCGCTAT TACGGCATCG GCGAGGGGCT GCTGTCGGCA
CCCCGGATGA TGTGGAGCAA CTTCGTCAAC TTCTTTGCCA ACCTGCGCGC CCTGCGCCAA
GTGATGGAGA TGGGCGATTC ACGCCGAGTG GCCTGGGACA AGACCACGCA CGAGTTCCCC
GCCATCGCCT CACCGGCCCG CACCCCGCTG GGCCACCGCC TTGTCGCCAA GGGCTACATC
AGCGAAGCGC AGCTCGAGCA GGCCATCACC AGCCCGGTGC GGCGGCGCCT GGGCCGCGAG
CTGCTGCTGC GTGGCTGGCT GACCAGCGAA CAGCTGGTGC AGACCCTGGC CGAGCAGCTC
GACCTGCCAT GGGCACCGCT CAACCCGTTC AAACTCGACC CGCAACTGAT CGCCCTGCTG
CCGCGCCGGC TGGCCACGCA CTACGGCGTG CTGCCGGTGG CCGAAGACGG CAATACGCTG
GTGCTGGCCA GCGAGAGCCC GGTCAGCCAG GTCTCGCTGG GGGTGATCAG CCGCCAGCTC
AAACGCCCGG TCAGCTGCCG CCTGGCACCC CAAGGCCGGG TGACCCTGGG CCTGCGCTAC
CACTACCCCA GCCCCTGGCA GACAGACCAG ACCCGGCAGA TGCTTGAAGT GCTCGAACGG
CACCAGGACA ACGCCGAACT GATTGAGCAG GTGAGTATCC ACCAGGTCAT GCTCGGTGCG
TTGCTGCAGG TGCGCGGCAT GGTCCCGGTG ACCCTGTTCA ACCAGGCCCT GATCGACTTC
GATCCCGAGC AGCAGAGCCT TGGCGAACAC CTGATCGCGC GCGGCATCAT CACCGAGCTC
GTGTTGCAGC AGGCGCTCGA AGAACAGGCC AGCGAACAGC AGGCTGCCTT TGACCTGATC
AGGGAGGTGG CATGA
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| Protein sequence | MSLAFIDFLT YVLFGLKILA IILAALMFLL GLDDLFIDLC YWCRKLFRHL RIYDKYARAD
EKRLFEVPEK PLAIMVPAWN EVGVVGEMAR LAASTIDYEN YQIFVGTYPN DPQTQADVDA
VCLHYPNVHK VVCARPGPTS KADCLNNIID AILRFQDDAR IEFAGFILHD AEDVISPMEL
RLFNYLLPAK DMIQIPVYPY APQWKGFTAG HYVDEFAENH GKDVIVREAL TGQVPSAGVG
TCFSRRAISA LLEDGDGIAF DVQSLTEDYD IGFRLKQKGM KCIFARYSVT DPALALKHEW
RPGMSREFAQ VICVREHFPR DWQHAIRQKS RWIVGIVFQG TSNLGWSRTG ALNYFLWRDR
RGLFAYLLGF LVNLLLLVLL AMWLVTVIAP QSWRFMSILS DSQLLTTLLW LNGLMLINRL
FQRGWFVTRY YGIGEGLLSA PRMMWSNFVN FFANLRALRQ VMEMGDSRRV AWDKTTHEFP
AIASPARTPL GHRLVAKGYI SEAQLEQAIT SPVRRRLGRE LLLRGWLTSE QLVQTLAEQL
DLPWAPLNPF KLDPQLIALL PRRLATHYGV LPVAEDGNTL VLASESPVSQ VSLGVISRQL
KRPVSCRLAP QGRVTLGLRY HYPSPWQTDQ TRQMLEVLER HQDNAELIEQ VSIHQVMLGA
LLQVRGMVPV TLFNQALIDF DPEQQSLGEH LIARGIITEL VLQQALEEQA SEQQAAFDLI
REVA
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