Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2929 |
Symbol | |
ID | 6111880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3243267 |
End bp | 3244829 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641622716 |
Product | threonine dehydratase |
Protein accession | YP_001749790 |
Protein GI | 170722102 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.333132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC TTAACGTCAG CCCCCGTACC CCGCTTACCC CTCAGCAGCT GCTGTCGGAG CAGGTGCGGC GCATTCTGTC TGCGCCGGTG TACGACCTGG CCATCGAGAC CCCCCTGCAA GCGGCACCAG CGTTGTCTGC CAGCCTGGGC AACCAGGTAT TGCTCAAGCG CGAAGACCTG CAGCCCACGT TCTCGTTCAA GATCCGCGGT GCCTACACCC GGCTGGCGCG CCTGACCCCC GCTCAGCGCG AGCGTGGGGT GATCACCGCA TCGGCAGGCA ACCACGCCCA GGGTGTGGCG CTGGCGGCCT CCCATCTGGG CATCAAGGCG ACCATCGTCA TGCCGACCAC CACGCCTTCG CTGAAAATCG AAGGTGTACG TTCACGGGGT GGGCATGTGG TGCTGCACGG TGAAAGCTTC CCCCATGCGC TGGCCCATGC ACTGACCCTG GCCGACAGCG AAGGCGCGAC CTTCGTGCCG CCTTACGATG ACCCTGACGT GATCGCCGGG CAGGGCACGG TGGGCATGGA GATCCTCCGC CAGCAGCCGG GTGCGCTGGA TGCCATCTTC GTGCCGGTCG GGGGCGGTGG CCTGGTTGCA GGGATCGCCG CGTACGTGAA GTACCTGCGC CCCGAGGTCA AGGTGATCGG CGTCGAGCCG GAAGACTCCA ATTGCCTGCA GGCCGCCATG GCTGCGGGCG AGCGGGTGAT CTTGCCGCAG GTGGGCACCT TCGCTGATGG CGTGGCGGTC GCCCAGGTCG GTGCGCATTG TTTTGAACTG TGTCGGCATT TCGTCGATGA GGTGGTGACC GTCAGCAGCG ATGAGCTGTG TGCAGCAATC AAGGACATCT ATGACGATAC CCGTTCGATC ACCGAGCCGT CTGGCGCGCT GGCTGTTGCG GGCATCAAGA AGTACGTGGC CCGCGAAGGC GCACAGGGAC AGACGCTGGT GGCGATCGAC TCCGGTGCCA ACGTCAACTT CGACCGCCTG CGTCATGTGG CCGAACGCGC CGAACTGGGT GAGCAGCGCG AGGCGATCAT TGCCGTTACC ATCCCCGAGC AGCCAGGCAG CTTCCGGGCC TTCTGTCAGG CGCTGGGCAA GCGCCAGATC ACCGAGTTCA ACTATCGCTA CTACCCCGGT AAGGAAGCAC GCCTGTTTGT CGGGGTGCAG ACGCACCCGC TGCACGACCC CAGGGAGAAA CTGCTGGCAA ACCTCGCCGA GCAGGGTTAC AGCGTGCTCG ACCTGACCGA CAACGAGCTG GCCAAGCTGC ATGTGCGCCA TACCGTGGGT GGCCATGCGG CGTCGGGGGC CGATGAGCGG GTGCTGCGCT TCGAGTTCCC GGAACGGCCG GGCGCATTGT TGGGCTTCCT GGAGCGGCTG GGCAAGCGCT GGAACATCAG CCTGTTCCAT TACCGCAACC ATGGCGCGGC CGAGGCGCGG GTGTTTGCCG CGCTGGAAGT GCCCGAGGAT GAGCAGGCAG GGCTGCCGCT GGCGCTGGAC GAGATGGGCT ATCGGTACTG GGATGAGACC GAGAATCCCG CTTACAAGCT GTTTCTTGGG TGA
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Protein sequence | MTSLNVSPRT PLTPQQLLSE QVRRILSAPV YDLAIETPLQ AAPALSASLG NQVLLKREDL QPTFSFKIRG AYTRLARLTP AQRERGVITA SAGNHAQGVA LAASHLGIKA TIVMPTTTPS LKIEGVRSRG GHVVLHGESF PHALAHALTL ADSEGATFVP PYDDPDVIAG QGTVGMEILR QQPGALDAIF VPVGGGGLVA GIAAYVKYLR PEVKVIGVEP EDSNCLQAAM AAGERVILPQ VGTFADGVAV AQVGAHCFEL CRHFVDEVVT VSSDELCAAI KDIYDDTRSI TEPSGALAVA GIKKYVAREG AQGQTLVAID SGANVNFDRL RHVAERAELG EQREAIIAVT IPEQPGSFRA FCQALGKRQI TEFNYRYYPG KEARLFVGVQ THPLHDPREK LLANLAEQGY SVLDLTDNEL AKLHVRHTVG GHAASGADER VLRFEFPERP GALLGFLERL GKRWNISLFH YRNHGAAEAR VFAALEVPED EQAGLPLALD EMGYRYWDET ENPAYKLFLG
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