| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2883 |
|---|
| Symbol | |
|---|
| ID | 6111834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3183341 |
|---|
| End bp | 3185002 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641622670 |
|---|
| Product | malonate decarboxylase, alpha subunit |
|---|
| Protein accession | YP_001749744 |
|---|
| Protein GI | 170722056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAA CGAAGAATCC ACCGCCGCAG TGGTCCAGGC GGCGCGCCGA GAAGCAGCGC
CGCCTGGAGC GGGTCCGTCA CTTGGCCGAC GGTGTGGTGC TGCCGACCGA GCGCATCGTC
GAGGCACTGG AGCTGTTAAT CGCCCCAGGT GACCGGGTGG TGCTCGAAGG CAACAACCAG
AAGCAGGCCG ACTTCCTCTC CCGTTCGCTG GCCAAGGCCG ACCCCGAGCG CCTGCACGAC
CTGCACATGA TCATGCCCAG CGTCAGCCGC GCCGAGCATC TGGACCTGTT CGAACGGGGT
ATTGCCCGCA AGCTCGACTT TTCTTTCGCC GGCCCGCAGA GCCTGCGCAT CGGCCAGTTG
CTGGAAGACG GCCTGCTCGA AGTCGGCGCC ATTCACACCT ACATCGAGCT GTACTCGCGC
CTGCTGGTCG ACCTGATCCC CAATGTCACT CTGGTCGCCG GGTTCATGGC TGACCGTGAC
GGTAATCTGT ACACCGGCCC CAGTACCGAG GACACCCCGG CACTGGTGGA GCCGGCAGCC
TTCAGCGATG GCTTGGTGAT CGCCCAGGTC AACCAGTTGG TCGACCGCGT CGACGACCTG
CCGCGCGTGG ACATTCCGGC TTCCTGGGTG GACTTCGTGG TGGTCGCTGA CCAGCCGTTC
TACATCGAGC CACTGTTCAC TCGCGACCCA CGGCACATCA AACCGGTGCA CGTGCTGATG
GCGATGATGG CCATCCGCGG CATCTACGAA AAACACAACG TGCAGTCGCT CAACCACGGC
ATTGGTTTCA ACACGGCCGC CATCGAGCTG ATCTTGCCGA CCTACGGCGA GTCGCTGGGC
CTGAAGGGCA AGATCTGCCG CAACTGGACG CTCAACCCGC ACCCCACGCT GATCCCGGCC
ATCGAGACCG GCTGGGTCGA AAGCGTGCAC TGCTTTGGCA CCGAACTGGG CATGGAGGAC
TACATCGCGC AACGCCCGGA CGTGTTCTTC ACCGGCCGCG ACGGCTCGCT GCGCTCCAAC
CGCATGATGT GCCAGCTGGC CGGGCAATAC GCGGTCGACC TGTTCATCGG CGCCACCTTG
CAGGTCGATG GTGATGGCCA TTCCTCGACC GTCACCCGCG GCCGCCTGGC CGGCTTCGGC
GGCGCGCCCA ACATGGGCCA CGACCCCCGC GGCCGGCGCC ACGCCACGCC GGCCTGGCTC
GACATGACGG TGCCCGAGAC CTTGCTCGAA CGCGGCCGCA AGCTGGTGGT GCAGATGGTC
GAAACCTACC AGGAAGGCGG CAAACCGACC TTCGTCGAAA CCCTGGACGC CGTGGAAGTG
GCGAAGAAGG CCGGCATGCC GCTGGCACCG GTGATGATCT ACGGCGATGA CGTCACCCAC
CTGCTGACCG AAGAGGGTAT CGCCTACCTG TACAAGGCCC GCAGCCTGCA AGAGCGCCAG
CAGATGATCG CCGCCGTGGC TGGGGTCACC GCCATTGGCT TGCGCCATGA CCCCAAGGAC
ACCCTGCGCC TGCGCCAGCA AGGCCTGGTG GCCTTGCCCG AAGACCTTGG CATCCGCCGC
ACCGATGCCA GCCGTGAACT GCTCGCCGCG CGCAGCATCG CCGACCTGGT GGAGTGGTCC
GGTGGCCTGT ACAACCCGCC CGCACGGTTC AGGAGCTGGT GA
|
|---|
| Protein sequence | MTITKNPPPQ WSRRRAEKQR RLERVRHLAD GVVLPTERIV EALELLIAPG DRVVLEGNNQ
KQADFLSRSL AKADPERLHD LHMIMPSVSR AEHLDLFERG IARKLDFSFA GPQSLRIGQL
LEDGLLEVGA IHTYIELYSR LLVDLIPNVT LVAGFMADRD GNLYTGPSTE DTPALVEPAA
FSDGLVIAQV NQLVDRVDDL PRVDIPASWV DFVVVADQPF YIEPLFTRDP RHIKPVHVLM
AMMAIRGIYE KHNVQSLNHG IGFNTAAIEL ILPTYGESLG LKGKICRNWT LNPHPTLIPA
IETGWVESVH CFGTELGMED YIAQRPDVFF TGRDGSLRSN RMMCQLAGQY AVDLFIGATL
QVDGDGHSST VTRGRLAGFG GAPNMGHDPR GRRHATPAWL DMTVPETLLE RGRKLVVQMV
ETYQEGGKPT FVETLDAVEV AKKAGMPLAP VMIYGDDVTH LLTEEGIAYL YKARSLQERQ
QMIAAVAGVT AIGLRHDPKD TLRLRQQGLV ALPEDLGIRR TDASRELLAA RSIADLVEWS
GGLYNPPARF RSW
|
|---|
| |