| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2879 |
|---|
| Symbol | |
|---|
| ID | 6111830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3180473 |
|---|
| End bp | 3181264 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641622666 |
|---|
| Product | malonate decarboxylase, gamma subunit |
|---|
| Protein accession | YP_001749740 |
|---|
| Protein GI | 170722052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.994306 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTG CCCTGAACTG GTTGCCTGGC CTGGCCGGCA GCGAAGCACT GCCGGGCTAT
CCCGCCTCGC TGCGGGTTAT CGACGGCGAG CTGGACAATC GCACGGCGCG CTTCATTGCC
GTGGTGCCGG ATGCGCACAA CCCGTTCCCG CGGGCGCGCA ACGGTGAAGT CGGCCTGCTC
GAGGGCTGGG CCCTGGCCAA GGCGGTGAGC GAAGCGATTG AGCTGGACCG CGATGGCGAG
AAACGCGCCA TCGTCGCGGT CATTGATGTG CCCAGCCAGG CCTATGGCCG CCGCGAGGAA
GCCTTGGGCA TCCACCAGGC GCTGGCCGCT GCGGTGCAGG CCTATGCCCA GGCACGCCTG
GCCGGGCACC CGGTCATCGG CCTGCTGGTG GGCAAGGCCA TGTCCGGTGC GTTCCTGGCC
CACGGCTACC AGGCCCAGCG GTTGATTGCA CTGGATGACA GCGGGGTGAT GGTGCACGCG
ATGGGCAAGG CAGCGGCGGC GCGAATCACC TTGCGCAGCG TCGAGGAACT GGAAGCCTTG
GCCGCTGAGG TTCCGCCGAT GGCCTACGAC CTGGCCAGCT ATGCCTCGCT GGGCCTTTTG
TGGCGGCGCT TGAGCGTGGA TAGCGCGGAT ACCCCGAGCG CAAGCGACCT GGCTCAGGTG
CGTGCTTGCC TGGCCGAAGC GCTGCGCGAT ATCGGCAACA CGACCGACCT GACGTCACGC
TTGGCCGGCG AGCACCGCAG CGCGTCCCGC GAAGTGCGTG CACGCTTGCG CAGCCAGTGG
CAGGAGGCCT GA
|
|---|
| Protein sequence | MNRALNWLPG LAGSEALPGY PASLRVIDGE LDNRTARFIA VVPDAHNPFP RARNGEVGLL
EGWALAKAVS EAIELDRDGE KRAIVAVIDV PSQAYGRREE ALGIHQALAA AVQAYAQARL
AGHPVIGLLV GKAMSGAFLA HGYQAQRLIA LDDSGVMVHA MGKAAAARIT LRSVEELEAL
AAEVPPMAYD LASYASLGLL WRRLSVDSAD TPSASDLAQV RACLAEALRD IGNTTDLTSR
LAGEHRSASR EVRARLRSQW QEA
|
|---|
| |