Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2844 |
Symbol | |
ID | 6111795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3147617 |
End bp | 3148357 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641622631 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001749705 |
Protein GI | 170722017 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.874316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACC CCCTGCAAGG GCAAACTGCA ATCGTCACTG GCGGCATGCG TGGCATCGGC CTGGCCATCG CGCAACGGCT GCACACCGCC GGTGCCCAGG TGGTGATCTG GGACCTCGCG GTGGATGGCT GGGACAGTGT CGGCAACGGT TTCGAGCCAG TCCTGCGCCA GGCTGTGGAT GTCGCCTCGC TGGCCTCGGT CGAGGCGGCA TTCGCTGATG TACTGGCGCG TGTGGGGCAG GTCGACATCC TGATCAACAA CGCTGGCATC AATGGGCCGG TGGTACCGTC CTGGGAATAC CCGCCAGAAG CCTGGGACAA GGTCATCGCC ATCGATCTGA ACGGTGTCTT CTACTGCTGT CGAACGGCCA TCCCGCATAT GCGCGAGCGC GGCTATGGGC GGATCGTCAA TGTGGCATCG ATGGCGGGCA AAGATGGCGT GCAGTACATA AGCGGCTACT CGGCTGCCAA GGCCGGGGTC ATCGCCTTCA CCAAGGCCGC GGCCAAGGAA CTGGCGCAGG ATGGCGTGTC GCTCAACTGC ATCGCCCCTG CGATGGTCGA AACCCCGTTG ATGGCCGAGA TGACTGCGGA GCATATCGCG GCGAGCAAGG CCAAGATTCC TATGGGGCGT TTCCTCAAGG CTGAGGAGAT TGCCAACATG GTGGCCTGGA TCGCCGGGCC GGAGTGCAGC TTTACCACAG GCTTCGTATT CGACCTCAGT GGCGGGAGGG CGACTTATTG A
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Protein sequence | MSHPLQGQTA IVTGGMRGIG LAIAQRLHTA GAQVVIWDLA VDGWDSVGNG FEPVLRQAVD VASLASVEAA FADVLARVGQ VDILINNAGI NGPVVPSWEY PPEAWDKVIA IDLNGVFYCC RTAIPHMRER GYGRIVNVAS MAGKDGVQYI SGYSAAKAGV IAFTKAAAKE LAQDGVSLNC IAPAMVETPL MAEMTAEHIA ASKAKIPMGR FLKAEEIANM VAWIAGPECS FTTGFVFDLS GGRATY
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