| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2840 |
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| Symbol | |
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| ID | 6111791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3143789 |
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| End bp | 3144688 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622627 |
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| Product | tartrate dehydratase subunit alpha |
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| Protein accession | YP_001749701 |
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| Protein GI | 170722013 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.327123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.371289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAAAG AAACAGCCGT GTCATCGCTG ACCGACGTGA TGGCCAAGTT CACCGCCTAC
ATCGGCAAGC GCCTGCCCAA GGACGTCAAG GAAAAGACCG CCAAACTGCG CGCCGCAGAA
ACCAACCCGC TGGCCATCGC GGTCTACGAT TCGATGGCCG ACAACCAGGA TTACGCCGAC
AAGCTCGACC GCCCCAGTTG CCAGGACACC GGCGTCATCC AGTACTTCAT TTCTGCCGGC
GCACGTTTCC CATTGCTGAG CGAACTTGAA GGCATCCTGG AAAACGCGAC GCGCGAGGCC
ACCATCAAAG GCCCGCTGCG CCATAACGCG GTGGAAACCT TCATCGAGAA AAATACCGGC
ACCAATACCG GGTCGAAGAT CCCGTGGCTG GACTGGGAAA TCATCCCCGA CGCCGACCAC
GCCATCGTCG ATGTGTACAT GGCCGGGGGA GGCTGCACCT TGCCCGGCTC GGCGAAGGTG
CTGATGCCGG GGCAGGGCTA CGAAGGGGTG ACCGAGTTCG TGTTCGACGT GATCACCTCG
CGCGGCGTGA ATGCCTGCCC GCCGCTGCTG GTCGGTGTAG GGGTGTCGAC CTCGGTTGAG
ACGGCGGCGC GCTTGTCCAA GCGGGCGATC CTGCGTCCGG TCGACTCCAG CCATCCCAAC
GAAAGCGCAG CGATGATGGA GAAGCTGCTG GAGGACGGCC TCAACGAAAT CGGCATCGGG
CCGCAGGGCC TGACCGGTAA CAGCAGCGTG ATGGGCGTGA ACATCGAGTC CTCGGCACGC
CACCCGTCGA CCATCGGCGT TGCCGTGTCG ACCGGTTGCT GGGCGCATCG ACGCGGCAAG
ATCCGCATCA ACGCCGACCT GTCCTATGAC ATTCTTTCGC ACGAGGGTGT AGTTCTGTGA
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| Protein sequence | MDKETAVSSL TDVMAKFTAY IGKRLPKDVK EKTAKLRAAE TNPLAIAVYD SMADNQDYAD
KLDRPSCQDT GVIQYFISAG ARFPLLSELE GILENATREA TIKGPLRHNA VETFIEKNTG
TNTGSKIPWL DWEIIPDADH AIVDVYMAGG GCTLPGSAKV LMPGQGYEGV TEFVFDVITS
RGVNACPPLL VGVGVSTSVE TAARLSKRAI LRPVDSSHPN ESAAMMEKLL EDGLNEIGIG
PQGLTGNSSV MGVNIESSAR HPSTIGVAVS TGCWAHRRGK IRINADLSYD ILSHEGVVL
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