| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2839 |
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| Symbol | |
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| ID | 6111790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3143184 |
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| End bp | 3143792 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641622626 |
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| Product | L(+)-tartrate dehydratase subunit beta |
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| Protein accession | YP_001749700 |
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| Protein GI | 170722012 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.134573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.450115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAAGA TCCTCAGCAC GCCGATCAAA GACGAAGACC TGGCCGGCCT CAACGTGGGC
GATGTGGTCT ACCTGACCGG CCAGTTGGTC ACCTGCCGCG ATGTCGCCCA TCGCCGCCTT
ATAGAACTCA AGCGGGAGCT GCCGGTGGAC CTGCGCGGCG GAGCGATCTT CCATGCCGGA
CCAATCGTGC GCAAGAAGGG AGACGGCAGC TTCGAGATGG TCTCCATCGG CCCGACCACC
AGCATGCGCA TGGAAAAGTT CGAGAAGCAG TTCATCGAAG AAACCGGCGT CAAACTGATC
GTTGGCAAAG GTGGCATGGG CCCGGAAACC ACGACCGGCT GCCTTGAAAA CAAAGCGGTG
CATGCGGTGT TTCCGGGGGG CTGCGCAGTG CTCGCTGCCA CTCAGGTCGA GGAGATCGAG
CGCGCCGAAT GGCAGGACCT GGGCATGCCG GAAACCTTAT GGGTCAACCG CGTGCGCGAG
TTCGGGCCGC TGATCATTTC CATTGATACC AAGGGCAATA ACCTGTTCGA GCAGAACAAG
GCGCGGTTCA ATGAGCGCAA GGGGGCGGTG ATCGAGAAGA TCAATAGCCA GGTGCGGTTC
ATCAAGTAA
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| Protein sequence | MKKILSTPIK DEDLAGLNVG DVVYLTGQLV TCRDVAHRRL IELKRELPVD LRGGAIFHAG
PIVRKKGDGS FEMVSIGPTT SMRMEKFEKQ FIEETGVKLI VGKGGMGPET TTGCLENKAV
HAVFPGGCAV LAATQVEEIE RAEWQDLGMP ETLWVNRVRE FGPLIISIDT KGNNLFEQNK
ARFNERKGAV IEKINSQVRF IK
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