Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2818 |
Symbol | |
ID | 6111769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3122045 |
End bp | 3122794 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641622605 |
Product | GntR domain-containing protein |
Protein accession | YP_001749679 |
Protein GI | 170721991 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.325191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAGC AACAGGTACA GGCAAAGACC CGGCGCAAGC CGCGCAGTCT GGCCCAGGAA CTGGTCACGG TGCTGACCGA GCGTATTCGC AGCGGCCAGC TCAAGCGCGG CGACAAGTTG CCGACCGAAT CGCAGATCAT GGCCGAGGAG GGCGTCAGCC GCACCGTAGT GCGTGAGGCC ATCTCGAGGC TGCAGGCCGC CGGTCAGGTC GAGACCCGCC ATGGCATCGG CACCTTTGTG CTGGACACGC CTGCCACGGG GGGCTTTCGC ATCGACCCGG CCACCGTGGT CACGCTGCGT GAGGTGCTGG CGGTACTGGA GCTGCGCATC GCCCTGGAGA TCGAGTCGGC AGGCCTTGCG GCGCAACGGC GCAGCGATGA AGAGCTGGCA GGCATGCGTG CGGCGCTGGA CGAACTCAAC GAGGGTGCTG CCCATGCCAC TGATGCGGTG TCGGCGGACT TCCAGTTCCA CCTGCGTATC GCCCAGGCCA GCGGCAATCA CTACTTTGCC GACATCATCA ACCACCTTGG TACCAGCATC ATCCCGCGTA CCCGGCTCAA CTCGGCGCGT CTGGCGCATG ATGACCAGGC GCACTACATG AGCCGCTTGA TGCATGAGCA CGAGGCGATC TACGAAGCCA TCGCCCGAAG CGACAGCGAA GGGGCCAAGA TGGCCATGCG TATGCACCTG AGCAACAGCC GTGAGCGGTT GCGTCAGGCG CATGCGGAGG CTGAGGCGCA AGGGGTCTGA
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Protein sequence | MTEQQVQAKT RRKPRSLAQE LVTVLTERIR SGQLKRGDKL PTESQIMAEE GVSRTVVREA ISRLQAAGQV ETRHGIGTFV LDTPATGGFR IDPATVVTLR EVLAVLELRI ALEIESAGLA AQRRSDEELA GMRAALDELN EGAAHATDAV SADFQFHLRI AQASGNHYFA DIINHLGTSI IPRTRLNSAR LAHDDQAHYM SRLMHEHEAI YEAIARSDSE GAKMAMRMHL SNSRERLRQA HAEAEAQGV
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