| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2809 |
|---|
| Symbol | |
|---|
| ID | 6111760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3111137 |
|---|
| End bp | 3111856 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641622596 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001749670 |
|---|
| Protein GI | 170721982 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.309944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.926456 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC AATTGTCCTT GCTGTCCTTC GCCAGTGGTG GCTGGGGCCA GGCGCTGCTG
GCCGGCGCGC TGGTGACCGT GTCACTGGCC CTCGCCTGCC TGCCCATCGG TTTGCCACTG
GGCCTTGTCG TGGCGCTCGC GGCGCGCTCG CGCAAGCGCC TGCCGCGCGC ATGGTCAACC
ACGTTTTCCA CTGTGTTCCG CGGCCTGCCC GAGCTGCTGA CCCTACTGAT CATCTATTAC
GGTTGCCAGA TCGCCGCACA GCAACTGCTG GCCGCCATGG GCTATCAAGG TGAGTTCCTG
ATCAATACGT TCCTCGCGGC GATGATCGCT TTCAGTCTGG TGTTCGCCGC CTTTTCCAGC
GAGATCTGGC TGGCTGCTTT CAAAACCCTG CCCAAGGGCC AGCTTGAGGC CTGTGCGGCA
TTGGGCCTGG GCAAGCGCAC CGCCTTCTTC AAGGTGGTAC TGCCACAACT GACGCGCATC
GCCCTGCCGG GGCTCTCCAA CAACTGGCTG TCGTTGCTCA AGGATACCTC GCTGGTATCG
ACCATCTCGC TGGTCGACCT GATGCGCCAG ACCAACCTTG CGGTCAGCGT GACCAAAGAG
CCGATGTTCT TCTACGGGGT GGCCTGCCTG GGTTACCTGC TGTTCTCGGC GCTGTCGGGG
CGAGTGTTCG CCTACATAGA ACGGCGCAGC AACCGCCACC TGCAAGGAGC GCGCGTATGA
|
|---|
| Protein sequence | MLDQLSLLSF ASGGWGQALL AGALVTVSLA LACLPIGLPL GLVVALAARS RKRLPRAWST
TFSTVFRGLP ELLTLLIIYY GCQIAAQQLL AAMGYQGEFL INTFLAAMIA FSLVFAAFSS
EIWLAAFKTL PKGQLEACAA LGLGKRTAFF KVVLPQLTRI ALPGLSNNWL SLLKDTSLVS
TISLVDLMRQ TNLAVSVTKE PMFFYGVACL GYLLFSALSG RVFAYIERRS NRHLQGARV
|
|---|
| |