| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2808 |
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| Symbol | |
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| ID | 6111759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3110205 |
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| End bp | 3110957 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622595 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001749669 |
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| Protein GI | 170721981 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.857979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.951072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA CCATGGCTAT GGTGGGTGCA TGTGCCCTGC TGCTGGCGGC TAACGCCAGC
GCCGAAACCC TGCGCTTCGC CACCGAAGGG GCCTACCCGC CCTTCAACTA TGTGGATGCC
GACAACCAGT TGCACGGTTT CGACATCGAC ATCACCCACG CCCTGTGCGA GCAGATGAAA
GTCGAGTGCA CCCTGGTGGC TCAGGACTGG GAAGGCATCA TCCCGGCCTT GATGGCACGC
AAGTACGATG CGGTGGTGGC TTCGATGATC GATACCGAGG AGCGCCGCAA GAAAATCGCC
TTCACCGACC ATTACTACCG CACCCCGCTG ACCGTCGCCG TGGCCAAGGA CAGCAAGATC
AGTGATGCGC AGAACACCTT CGAAGGCTAC ACGGTGGGTG CCCAGTCTTC CTCGACCCAG
GCGATCTATG CCGAAGACGT GTATGCCAAG GCGGGCGCTG ACGTGAAGCT CTACCCGACC
ATGGACGAGG CCAATGCCGA CCTCGCGGCC GGCCGCCTGG ACGGAGTGAT CGCCGACAAG
TTCCCGTTGC ACGAGTGGAT GAACAAGAAC GGCCAGGACT GCTGCAAGGT GCTGGGTGAC
GTGGCCGGCA CCAAGGCCAA TGCCGCCATC GCCGTGCGCA AGGACGATGA CGCACTGCGC
CAGCGGCTGA ATACCGCGCT GGCGCAAATC GTCGCCAACG GTACCTACCA GAAAATCGCC
AGCAAGTACT TCGACTTCGA TATCTACAAC TGA
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| Protein sequence | MNKTMAMVGA CALLLAANAS AETLRFATEG AYPPFNYVDA DNQLHGFDID ITHALCEQMK
VECTLVAQDW EGIIPALMAR KYDAVVASMI DTEERRKKIA FTDHYYRTPL TVAVAKDSKI
SDAQNTFEGY TVGAQSSSTQ AIYAEDVYAK AGADVKLYPT MDEANADLAA GRLDGVIADK
FPLHEWMNKN GQDCCKVLGD VAGTKANAAI AVRKDDDALR QRLNTALAQI VANGTYQKIA
SKYFDFDIYN
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