| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2802 |
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| Symbol | |
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| ID | 6111753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3103006 |
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| End bp | 3104298 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622589 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001749663 |
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| Protein GI | 170721975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.662741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTT CCGTCTCCCG ATCCCCTCGT CGCTGGCTCG TTGGCCTGCT GATCCTGCTG
CTGGTGGCCC TGCTGGCCTG GTGGTTGTGG CCCGCTGCAA CGCCTGCCCC AAAAGAAGCG
GGCGGGGGTC GCCCGGGCAA GGGCATGGGC ATCGGCATGG GCCGTCCCGG CTTCGGTGGC
TCCACCGAAG CGGTGCCAGT GCGCGTTGAA CCTGCACGGG TGGGCGACTT TCCGCTCTAC
TACAAGGCGC TTGGCACAGT CACCGCGACC AATACCGTCA ACGTGCGTAG CCGTGTTGCC
GGTGAGCTGG TGAAAATCCA CTTCAAGGAG GGCCAGCAGG TCAAGGCTGG CGACTTGCTG
GCCGAGATCG ACCCGCGCTC CTACCGCATC GCGCTGCAGC AGGCCGAAGG CACGCTGGCG
CAAAACCGGG CGCAGCTCAA GAACGCCCAA GTCGACCTGG CGCGCTATAA AGGCCTGTAC
GCCGAAGACA GCATCGCCAA GCAGACGCTC GATACCTCCG AAGCCCAGGT GGCGCAGTTC
CAGGGGCTGG TTAAAACCAA TCAGGCTCAG GTCAACGATG CCCGCCTGAA CCTCGACTTC
ACCCAGATCC GTGCGCCGAT CAGTGGCCGG GTGGGCCTGC GTCAGCTCGA CCTGGGCAAC
CTGGTGGCGG CCAATGACAC TACCGCGCTG GTGGTCATCA CCCAGACCGA ACCGATCAGC
GTCGCCTTCA CCTTGCCGGA AACCGAACTG ACCACCGTGC TGGAACGTTA CCGCAGCGGT
GCCAGCCTGC CGGTCGAGGC CTGGGACCGC GGCGACAGCA AGCTGCAGTC CACTGGCGTG
CTGGCCAGCA TCGACAACCA GATAGACATC ACCACCGGTA CCCTGAAGTT CAAAGGCCGC
TTCGAGAACA AGGACATGGC GCTGTTCCCC AACCAGTTCG TCAACGTGCG CCTGTTGGCC
GACACCCTCA AGCAGGTCGT AATGGCCCCG GCGGCGGCCA TCCAGTTCGG CAACGACGGC
ACCTTCGCCT ATGTCGTCAC TGCCGACAAC ACGGTCAATG TGCGCAAGCT CAAGGTGGGC
CCAAGTGACG GTGAGAACAG TGTGATCCTT GAAGGACTCA AGGCCGGTGA TCGCCTGGTG
CTCGAAGGCA CCGACCGCCT GCGCGAAGGT TCCAAGGTCG AAGTGGTCGA AGACAGCTCG
CAAGTACCGA CCACCCCCGG CCAGCACCTG CAAGGGCAGG ACGGCAAAGG CTCGGCCCAG
ACCGGTGAAA CGGCAGGCAA GGCGGGCGCA TGA
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| Protein sequence | MRVSVSRSPR RWLVGLLILL LVALLAWWLW PAATPAPKEA GGGRPGKGMG IGMGRPGFGG
STEAVPVRVE PARVGDFPLY YKALGTVTAT NTVNVRSRVA GELVKIHFKE GQQVKAGDLL
AEIDPRSYRI ALQQAEGTLA QNRAQLKNAQ VDLARYKGLY AEDSIAKQTL DTSEAQVAQF
QGLVKTNQAQ VNDARLNLDF TQIRAPISGR VGLRQLDLGN LVAANDTTAL VVITQTEPIS
VAFTLPETEL TTVLERYRSG ASLPVEAWDR GDSKLQSTGV LASIDNQIDI TTGTLKFKGR
FENKDMALFP NQFVNVRLLA DTLKQVVMAP AAAIQFGNDG TFAYVVTADN TVNVRKLKVG
PSDGENSVIL EGLKAGDRLV LEGTDRLREG SKVEVVEDSS QVPTTPGQHL QGQDGKGSAQ
TGETAGKAGA
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