| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2798 |
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| Symbol | |
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| ID | 6111749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3092932 |
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| End bp | 3095019 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622585 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001749659 |
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| Protein GI | 170721971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCG GTAGTTACTC TTCTTCGCTG GTGCTGATCT CACTGTGCGT GGCCATCCTT
GCCTCCTATA CCGCCCTCGA TTTGACCGGC CGCATCGCTA CCGCCCAAGG CAGGGCGGTG
CACCTTTGGA TGGGCGGTGG AGCGTTGGCG ATGGGTATCG GCGTCTGGTC GATGCACTTC
ATCGGCATGC TTGCCTTCAG CCTGCCAGTC GAACTGGGCT ATGACATTGG CCTGACCGCC
TTCTCATTGC TGATCGCCGT GCTGTCTTCG GGGTTTGCCC TATGGCTGGT GAGCCAACCG
AGCCTGCCGT GGCTGCAACT GGCGTTTGGC GCACTGTTCA TGGGGGCCGG CATCAGTTGC
ATGCATTACA CCGGTATGGC AGCGTTGCGC ATGCTACCGG GTATCGACTA CGACCCGACG
CTGTTTGGCG CCTCGCTGGC GATCGCAGTG GGCGCATCGG CGGCAGCGTT GTGGATTGCC
TTCCGGTTGC GCCAGCATAC CCCTTACGTG CGCCAGGTCC GTGGGCTGGC GGCTGTGCTG
ATGGGCGTTG CCATCGTTGG CATGCACTAC ACCGGGATGG CCGCAGCCAA CTTCCCTCAG
GGCAGTTTCT GTGGTGCCCT GCCAGACGGG TTGCAAGGTG ACGGGCTGGT CTATCTGGTT
CTGATCACTA CCTTGGCGGT GCTCGCAGTG GCGTTGCTGA CCTCGGTGCT CGATGCGCGC
CTGGAGGCAC GCACTGCGGA GCTTGCGCGT TCGCTGACCC TCGCCAACCA GGAACTGACG
CAACTGGCGC TACATGACAC GCTGACCGGC CTGCCCAATC GCACGCTGCT TTCCGACCGT
ATCGAGCAGG CGATCGGCAA GGTGGCGGAG CAGGGCGGTT GTTTTGCGCT GATGTTCATC
GACCTGGACG GCTTCAAGCC AGTCAATGAT GCGTTTGGTC ACCATGTGGG CGACCTGCTG
CTCAAGGCGG TGGCAGCACG CTTGCGCGGC CACTTGCACA GCCAGGACAC ACTGGCGCGC
ATTGGCGGCG ATGAGTTTGT GTTGCTGGTG GAACTGCAGG AGCCCGCAGA TGCCATGGAT
GTTGCAGTCA AACAGGTCAA CCTGGTGTCG CGGGCGTTCC GCGTGGCCGA GCATGACCTG
CAATTGACGG CGAGCCTTGG CATTGTCCTG TATCCGGGTA ATGGCCAAGA CCAGCTAGAG
TTGCTGCGCA ACGCGGATGC TGCCATGTAT CACGCCAAGA GCGCCGGCAA GAATGGCTAC
AGCTTCTTCG ATGCTTCCAT GAACAGCAAT GCCCGCCAGC AGTTGCAACT GCTGCAGGAC
CTGCGCATGG CCCTGGAGCA ACGTCAGTTC CGCTTGCATT ACCAGCCCAA GTTCGCCGCG
CAGGCTTGCC AGCCGATCGG CGCCGAGGCT TTGTTGCGCT GGCAGCATCC GCAGCACGGG
CTGCTACTGC CGGACCGCTT CATTGGCCTG GCAGAAAAAA CCGGCCTGAT CATCCCGATT
GGCGAGTGGG TGCTGGACGA AGCCTGCCGG CAGATGCGCC AATGGCTTGA CCAGGGGTAT
GAAAACTGGC GCATGGCGGT CAACCTGTCC GCGATCCAGT TCTGCCATGC CGGTCTGGTT
GACAGCGTTG CCCGCGCCCT GCGCGACAAT CACCTGCCAG CCAACTGCCT GACCCTGGAG
ATCACCGAAA CCACTGCGAT GCATGATGCC GATGCCAGCC TGGCGGTGCT GCAGCGGCTG
TCCGACATGG GGGTGGACCT GTCCATCGAT GACTTCGGTA CCGGCTACTC GAGCCTGATG
TACCTCAAGC GCTTGCCCGC CAACGAGCTG AAGATTGACC GCGGTTTCGT CCGCGACCTG
GAGCAGGACA GCGACGACGC AGCCATTGTC TCGGCCATCG TTGCATTGGG CCAGGCGCTG
GGCTTGCGTA TTGTTGCCGA GGGTGTGGAG ACCGGCGGGC AGCAGGACTT CCTGACGCGT
CTGGGCTGTG ATTCGCTGCA GGGTTACCTG CTGGGTCAAC CGGTGCCGGC CGAGCAGTTC
ATGGGGACAT TGCAGGTATT GCAGCAAAAC CCGGAGGTGG TCGCCTAG
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| Protein sequence | MLTGSYSSSL VLISLCVAIL ASYTALDLTG RIATAQGRAV HLWMGGGALA MGIGVWSMHF
IGMLAFSLPV ELGYDIGLTA FSLLIAVLSS GFALWLVSQP SLPWLQLAFG ALFMGAGISC
MHYTGMAALR MLPGIDYDPT LFGASLAIAV GASAAALWIA FRLRQHTPYV RQVRGLAAVL
MGVAIVGMHY TGMAAANFPQ GSFCGALPDG LQGDGLVYLV LITTLAVLAV ALLTSVLDAR
LEARTAELAR SLTLANQELT QLALHDTLTG LPNRTLLSDR IEQAIGKVAE QGGCFALMFI
DLDGFKPVND AFGHHVGDLL LKAVAARLRG HLHSQDTLAR IGGDEFVLLV ELQEPADAMD
VAVKQVNLVS RAFRVAEHDL QLTASLGIVL YPGNGQDQLE LLRNADAAMY HAKSAGKNGY
SFFDASMNSN ARQQLQLLQD LRMALEQRQF RLHYQPKFAA QACQPIGAEA LLRWQHPQHG
LLLPDRFIGL AEKTGLIIPI GEWVLDEACR QMRQWLDQGY ENWRMAVNLS AIQFCHAGLV
DSVARALRDN HLPANCLTLE ITETTAMHDA DASLAVLQRL SDMGVDLSID DFGTGYSSLM
YLKRLPANEL KIDRGFVRDL EQDSDDAAIV SAIVALGQAL GLRIVAEGVE TGGQQDFLTR
LGCDSLQGYL LGQPVPAEQF MGTLQVLQQN PEVVA
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