| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2722 |
|---|
| Symbol | |
|---|
| ID | 6111673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3015386 |
|---|
| End bp | 3016009 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641622509 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001749583 |
|---|
| Protein GI | 170721895 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.299821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0652266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGT CGAGCCTGTT GTTATTCATC CCCGCCTGCT TCGCCTTGAA CATGGCACCG
GGGCCGAACA ACCTGTTGTC GTTGCACAAT GCCAGCCGCT ATGGCTTGCG TACCGCATGC
GTGGCAGGTG GCGGGCGCAT TCTCGCCTTC AGCGGCATGA TTGCCCTGGC AGCGATGGGC
CTGGCGGTGG TGCTGCACAC CAGTGAGTAC CTGTTCCTGA TGATCAAGGT GGTGGGGGCG
GCCTACCTGT TCTACATCGC CTGGCAGCTG TGGCGCGCTC CGGTGGGCGA GGCGCTGGTG
GCGAGCGAGC AGCCGCGTGG CAGTTGGCGC CTGGCGCGCC AGGAGTTCTG GGTTGCCGCA
GGCAACCCGA AAGCGATCCT GATTTTTACC GCCTTCCTGC CACAGTTCGT CTCGGTGGGC
AGCCCCACCC CGGTCAGTGA GCAGTTCCTC TGGCTGGGGG TACTGTTCCT GCTTCTGGAG
TGGGCGGCGA TTGCCATCTA TGCCGGCCTT GGCGCCTACC TGCAGCGCTG GTTCAGCCAG
CCAGGGCCGC GCCGGCTGTT CAACCGGGTC AGCGCCTGCC TGCTCGGTTG CGCTGGCCTC
GGGTTGCTGG CCGCACGCCG TTAA
|
|---|
| Protein sequence | MDLSSLLLFI PACFALNMAP GPNNLLSLHN ASRYGLRTAC VAGGGRILAF SGMIALAAMG
LAVVLHTSEY LFLMIKVVGA AYLFYIAWQL WRAPVGEALV ASEQPRGSWR LARQEFWVAA
GNPKAILIFT AFLPQFVSVG SPTPVSEQFL WLGVLFLLLE WAAIAIYAGL GAYLQRWFSQ
PGPRRLFNRV SACLLGCAGL GLLAARR
|
|---|
| |