| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2714 |
|---|
| Symbol | |
|---|
| ID | 6111665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3006608 |
|---|
| End bp | 3007666 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641622501 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001749575 |
|---|
| Protein GI | 170721887 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.124868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCT ATATCCTGCG CCGCCTGCTG CTGATCATCC CCACGCTGCT GGCGATCCTG
CTGGTCAACT TCGCCATCGT CCAGGCTGCC CCCGGCGGCC CTGTGGAGCA GGCTGTGGCC
AGGCTGCAGG GCATCGGCGG CGGGGCACCG GGCGCCCGGG CCGACGTGGT TCATGGCGAA
TCCCGCGCCA CCCGGGGCCT GGACCCGAAA CTGATCGAGG AGATCAAGCG CCAGTACGGC
TTCGACAAGT CGGCCCCTGA GCGCCTGTGG CTGATGCTCG GCCAGTATGC ACGGCTGGAT
TTCGGCCAGA GCTTCTTCCG CGGCGCCAAG GTCACCGATC TGATTCTGGA CAAGCTGCCG
GTGACCCTTT CACTGGGGTT CTGGGCCACG TTGATCACCT ACCTGGTGTC GATCCCGCTG
GGCATCCGCA AGGCGGTGCG CCACGGCAGC CGCTTCGATG CCTGGAGCAG TGCGCTGATC
GTGATCGGTT ACGCCCTGCC CTCTTTCCTG TTCGCCTTGC TGTTGATCGT GCTGTTCGCC
GGTGGCACCT CGCTGAACTG GTTCCCGGTA CGCGGCCTGG TCTCGGAAAA CTTCGACCAG
CTCAGCCTGC TGGGCAAGGT CGCCGACTAC TTCTGGCACC TGGTGCTGCC GGTGGGTGCA
CTGGTGGTCG GCGGCTTCGC CACGCTGACA TTGCTGACCA AGAACGCCTT CCTCGACGAA
ATCTCCCGTC AGTACGTGGT CACGGCACGG GCCAAGGGCC TGAGCGAGCG CCGGGTGTTG
TATGGCCACG TGCTGCGCAA TGCCATGCTG GTGGTGCTGG CTGGATTGCC GCAGGCGCTT
ATCACGGTGT TCTTCGCAGG ATCCCTGCTG ATCGAGGTGA TTTTCTCGCT CGATGGCCTT
GGGCGAATGA GCTACGAGGC AGCGGTGTCG CGTGACTACC CGGTAGTGTT CGGCACGCTG
TTCATCTTCA CCCTGGCCGG CCTGCTGATA CGCCTGATCG GCGACTTGTC GTATACCTTG
CTCGATCCGC GCATCGACTT CGACGCGAGG ACGCACTGA
|
|---|
| Protein sequence | MTSYILRRLL LIIPTLLAIL LVNFAIVQAA PGGPVEQAVA RLQGIGGGAP GARADVVHGE
SRATRGLDPK LIEEIKRQYG FDKSAPERLW LMLGQYARLD FGQSFFRGAK VTDLILDKLP
VTLSLGFWAT LITYLVSIPL GIRKAVRHGS RFDAWSSALI VIGYALPSFL FALLLIVLFA
GGTSLNWFPV RGLVSENFDQ LSLLGKVADY FWHLVLPVGA LVVGGFATLT LLTKNAFLDE
ISRQYVVTAR AKGLSERRVL YGHVLRNAML VVLAGLPQAL ITVFFAGSLL IEVIFSLDGL
GRMSYEAAVS RDYPVVFGTL FIFTLAGLLI RLIGDLSYTL LDPRIDFDAR TH
|
|---|
| |