| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2713 |
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| Symbol | |
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| ID | 6111664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3004785 |
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| End bp | 3006611 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622500 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001749574 |
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| Protein GI | 170721886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.155019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTGG GGATCGTGCT GGCATCCATG GGTTTTACCG CCCTGGCCGA ACCGACCCAC
GCCCTCACCG TCTACGGTGA AGCCCCGCGC TACGCCCAAA CCTTCCGCCA CTTCGACTAC
GTCAACCCCG ATGCCCCCAA GGGCGGTACC CTGCGCCGCT CGGCCACCGA AATCGGTCAG
TTCGACCACA TTCTGCCGTA CATCGACAAA GGTATCGGCG TCAGCGAGGT CGATGGCTGG
CTGTACGCTC CCTTGGCAGT GCGTTCATTC GATGAGCCCT ATACGGTCTA TGGCCTGATC
GCCCGACGCA TGGAGCGCGG ACCGCAGGAC GCCTGGCTGC GTTTCGATAT CGACCCCAGG
GCAACCTTTG CCGACGGCAA ACCTGTGCGT GCCGAGGATG TGCGCTTCAG TTACGACAAG
CTGATGAGCG AGGGCAGCCT CAAATACCGG ACCCAGTTCG CCGATGTGGC GGGTGTCACG
GTCGAAGGCC CGCACCGTGT GCGCTTCGAT TTCAAGCAAC CCCACGGCCG TACACTGCCC
CTGGACCTTG CCAGTTTGCC GGTCCTGCCC GAACACGACT GGAAAAGCCG CGACTTCGCT
AACGGCGCCG GCTTCGACAC ACCGGTCGGC AGCGGCCCAT ACCGCATCGG GCGGATCGAC
AATGGCCGCA GCGTCACCTT CGAGCGTGAC CGGCACTGGT GGGCCAAGGA CTTGCCCGTC
AGCCGCGGCC GTTTCAACTT CGAGCGCATT CGCGTCGAGT ACTTTGGCGA TACCGAGGTG
GCGCGCCAGG TACTCAAAGG CGGTGGCTAC GACTACAACC GTGAGTTCTC GGCCACGGCC
TTCACCCTCG GTTACAACGG TGCACAACTG GATGACGGCC GCCTGCAGCG CGCCCACCTG
GGCCCGGCCA AGCCACAGAC CGCCCAGGGG TTCGTGTTCA ACCTCGACCG GCCGCAGTTC
AAGGACCGCC GCGTGCGCCA GGCGCTGGCC ATGCTATGGG ACTTCGAGTG GAGCAACCGG
CAGATGATGC GCAACCTGTA CATCCGCCAG CAAAGTATTT TTTCCAACAC CCCGCTGGCT
GCGCGCGAAT TGCCGGATGC CGGTGAACTG AAACTGCTTG AGCCGCTGCG CGGCAAGGTA
CCAGGCGAAG TCTTCAGCCA GGTGTTCACG GCCCCCTTAA CCGATGGCTC GGGGATTATC
CGCACGCAGC AACTGCAGGC CCTGGCCCTG CTGCAGCAGG CGGGTTGGCA CCCTGAGGGT
GATCACCTGG TCAACGCCGA GGGCCAGCCG CTGGCATTCA CCTTCCTCAA CGGCCAGGCC
GGCCTTGAGC GTCTGCTGCT GCCGTGGAAG CGTAACCTGG CACAGATCGG CGTTACCCTG
AACATCCGCA ATGTCGACTC GGCCCAGTAC GTCAATCGTC TGATGGCCCG CGACTACGAC
ATGATCGTCA CCGGCTACCC GACCACCCTC TCACCGGGTG CCGAACTCTA CAACTACTTC
GGGTCTGCAG CAGCCAACGA CCCAGGCTCG AACAACCTGA TGGTGCTCAA GGACCCAGCG
GTGGACAGCC TGATCGACGG GCTGGTGCGC GCCGACACCC AGGCTGACAT GCGGCGCTAC
GCCCATGCGC TGGACCGTGT GCTGCAATGG AACTACTACT GGATCCCCAA CTACTACCCG
CCCGGCAGTT CGACCGTGTG GTGGAACCGC TTCGGCCTGC CCAAGGTCCA GCCTGCTTAT
GACGAAGGGC TGGACAGCTG GTGGGAAATC AGCCCGAACG CCCTGACCAG CGCGCAGATG
GCCGAGCGCC AGAAGGCTGC GCCATGA
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| Protein sequence | MFLGIVLASM GFTALAEPTH ALTVYGEAPR YAQTFRHFDY VNPDAPKGGT LRRSATEIGQ
FDHILPYIDK GIGVSEVDGW LYAPLAVRSF DEPYTVYGLI ARRMERGPQD AWLRFDIDPR
ATFADGKPVR AEDVRFSYDK LMSEGSLKYR TQFADVAGVT VEGPHRVRFD FKQPHGRTLP
LDLASLPVLP EHDWKSRDFA NGAGFDTPVG SGPYRIGRID NGRSVTFERD RHWWAKDLPV
SRGRFNFERI RVEYFGDTEV ARQVLKGGGY DYNREFSATA FTLGYNGAQL DDGRLQRAHL
GPAKPQTAQG FVFNLDRPQF KDRRVRQALA MLWDFEWSNR QMMRNLYIRQ QSIFSNTPLA
ARELPDAGEL KLLEPLRGKV PGEVFSQVFT APLTDGSGII RTQQLQALAL LQQAGWHPEG
DHLVNAEGQP LAFTFLNGQA GLERLLLPWK RNLAQIGVTL NIRNVDSAQY VNRLMARDYD
MIVTGYPTTL SPGAELYNYF GSAAANDPGS NNLMVLKDPA VDSLIDGLVR ADTQADMRRY
AHALDRVLQW NYYWIPNYYP PGSSTVWWNR FGLPKVQPAY DEGLDSWWEI SPNALTSAQM
AERQKAAP
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