| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2711 |
|---|
| Symbol | |
|---|
| ID | 6111662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3003250 |
|---|
| End bp | 3004311 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641622498 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_001749572 |
|---|
| Protein GI | 170721884 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.12104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCT CGAACCTCGC TCTGCCCCTG ACCCAGCCAA ACGCTGCCAA CACCACTGTC
AGCCGTCGCC TGCCCAGCCC GCACCTGCTC AAGCAGCAGA TGCCGCTTTC AATCGAACAT
GCCCAGCAAG TCCAGGCCCA GCGCCAGGCC ATTCGCGCCA TCCTTGAAGG CCGCGACCCG
CGCCTGCTGG TGGTCGTCGG CCCCTGCTCG ATTCACGACC CACGCTCGGC CCTTGAATAT
GCCGACCGCC TGGCGGCCCT GAGCCGCGAA GTCGACGACA AGTTGCTGCT GGTGATGCGC
GCCTACGTGG AGAAACCGCG CACCACGGTG GGCTGGAAAG GCCTGGCCTA CGACCCGCAC
CTCGATGGCA GCGACGACAT GCATGGCGGC ATCGCCCTGT CCCGTGGCTT GATGCTGAAC
ATGATCGAAC GCGGGCTGCC GATCGCCACC GAGCTGCTGC AGCCGATGGT CGCCGGTTAC
TTCGATGACC TACTGGGCTG GGCGGCGATT GGCGCGCGTA CCACCGAATC GCAGGTTCAC
CGTGAGATGG TCAGCGGCCT GGAGTTGCCG GTCGGTTTCA AGAACGGTAC CGATGGCGGT
GTCGCCATCG CATGCGACGC GATGCGCAGC GCCGCCGCCG CGCACCGCCA TTTCGGTATG
GATGCGCAAG GCTACCCGGC AATCATTGAG ACCTTGGGCA ACCCGGATAC CCACCTGGTG
CTGCGCGGCG GCCACAAGGG CCCGAACCAC GACAGCACCA GCATTGCCCA AGCCCGCCAA
GGGCTGGCCA AGGCGGGTCT GCAGGCGCGG ATCATGGTCG ATTGCAGCCA TGCCAACAGC
GGCAAGGACC CAGCGCGGCA GCCCGCAGTG TTCGAGGACG TGCTGGCTCA GCGCCTGGCC
GGCGACACAT CGCTTGTCGG GGTGATGCTC GAAGGCCACC TGTTCGACGG TTGTCAGGCA
CTGGGCAAGG GCCCGCTGAA GTACGGCGTG TCGATCACCG ATGGCTGCCT GGGCTGGGAA
GCGACACAAA CCCTGCTGCG TGAGGCCGCA GCGCGTATGT AG
|
|---|
| Protein sequence | MQASNLALPL TQPNAANTTV SRRLPSPHLL KQQMPLSIEH AQQVQAQRQA IRAILEGRDP
RLLVVVGPCS IHDPRSALEY ADRLAALSRE VDDKLLLVMR AYVEKPRTTV GWKGLAYDPH
LDGSDDMHGG IALSRGLMLN MIERGLPIAT ELLQPMVAGY FDDLLGWAAI GARTTESQVH
REMVSGLELP VGFKNGTDGG VAIACDAMRS AAAAHRHFGM DAQGYPAIIE TLGNPDTHLV
LRGGHKGPNH DSTSIAQARQ GLAKAGLQAR IMVDCSHANS GKDPARQPAV FEDVLAQRLA
GDTSLVGVML EGHLFDGCQA LGKGPLKYGV SITDGCLGWE ATQTLLREAA ARM
|
|---|
| |