| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2707 |
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| Symbol | benD |
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| ID | 6111658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2998744 |
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| End bp | 2999505 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641622494 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001749568 |
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| Protein GI | 170721880 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.539848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.273496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACC GATTCCATAA CAAAGTAGCC CTGGTCACCG GTGCCGCTCA AGGCATCGGC
CGTGGCGTGT GCTGGCGGCT GAAGGCCGAA GGCGCGCAGG TGGTTGCCGT GGACCGCTCC
GAACTGGTCC ATGAACTGGC CGGGGAGGGC GTGCTGACGC TGATCGCCGA TCTTGAGCAA
TACACCGACT GTGCCCGCGT CATGGCCTTG GCGGTAGAAG CGTTCGGTCG CATCGACGTT
CTGGTCAACA ACGTTGGCGG CACCATCTGG GCCAAGCCGT TCGAACACTA TGAAGTGCCG
CAGATCGAAG CCGAAGTCCG CCGCTCGCTG TTCCCCACCC TGTGGTGCTG CCACGCTGCG
CTCCCGTACA TGCTCGAACG CGGCAGCGGC GCCATCGTCA ACGTCTCCTC GATTGCCACC
CGCGGCGTCA ACCGCGTGCC CTACGGCGCG GCCAAAGGCG GGGTCAATGC ACTGACCGCC
TGCCTTGCCT TCGAAACCGC CGGCCGCGGC ATCCGGGTCA ACGCTACCGC CCCCGGCGGC
ACCGAGGCGC CGCCACGGCG CGTGCCACGC AATGAGGCCG AGCAGAGCGA GCAGGACAAG
CGCTGGTACC AGCAGATTGT CGACCAGACC CTGGACAGCA GCCTGATGCA CCGCTACGGC
AGCATTGACG AACAGGTTGG CGCGATCCTT TTCCTGGCCA GTGACGAGGC GTCCTACATC
ACCGGCGTGA CCCTGCCGGT GGGGGGCGGC GACCTCGGCT GA
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| Protein sequence | MNNRFHNKVA LVTGAAQGIG RGVCWRLKAE GAQVVAVDRS ELVHELAGEG VLTLIADLEQ
YTDCARVMAL AVEAFGRIDV LVNNVGGTIW AKPFEHYEVP QIEAEVRRSL FPTLWCCHAA
LPYMLERGSG AIVNVSSIAT RGVNRVPYGA AKGGVNALTA CLAFETAGRG IRVNATAPGG
TEAPPRRVPR NEAEQSEQDK RWYQQIVDQT LDSSLMHRYG SIDEQVGAIL FLASDEASYI
TGVTLPVGGG DLG
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