| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2682 |
|---|
| Symbol | |
|---|
| ID | 6111633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2967479 |
|---|
| End bp | 2968450 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641622469 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001749543 |
|---|
| Protein GI | 170721855 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGA CACGTTTGCT CAGGCAGTTC ATTGCCGTGG CCGAGGAGCT GCACTTTCAC
AAGGCAGCCA TCCGCCTGCA CATGGCACAG CCGCCCCTGA GCCAGGCGAT CAACCGACTC
GAAGAGAAGC TGGGCTTCAG CCTGTTCCTG CGCAACAAGC GCGGGGTCAA GCTCACCGCC
GCGGGCATGG CCTTCCTGGA AACCGCCTAC CGTACCCTCA AGGAGTTGGA ACAAGGCATC
GAATACGCCC GCAACGTGTC CGAGGGCATC TGCGGCAAGC TGACCATCAC TGCCATTTCC
ATCGCTTACT ACGAGTCGCT GCTCAATACC CTGAAGAAAT TCCGCGAAAT CTACCCGAAC
GTGCGGCTGA CCATTCGCGA AATGCCTTCG GCCTCCCAGG CCAAGGCGTT GATGGCCGGC
GAAGCGGACA TCGGCTTCAT GCGCAAGCTG CCGATGCCAC CAGACACCAT CGAATCGAGG
TTGCTGCTCA ATGAGCAGAT CGTCATGGCC CTACCCGCCA ACCACGCCAA GGCGCATCAG
CCTATGGTCG ACCTGCGGGA TTTTGCCGAA GAGGACTTCG TATTCACCCC GCAGGCGCTT
GGCAGCGGCT ACCACAGCCA GTTGATTGCG TTGTGCGAAT CGGCCGGTTT CTACCCCAAA
GTGGTGCAGG AAGCGGCGCA GATCCACACC CTGATCGGGC TGGTAGCTTG CGGTTTCGGC
GTTGCCCTGG TGCCTGAATC GATTGCCTAC TCGACGCTGC GCGAGCGCGT GCAGTTTCGC
CCTATCCGAC CGATCAAGGA CCAGCCAACG CCGACCATGG GGCTGTATAT GAACTGGAAC
ACACAGAACG CCTCTCCAGC CTTGGGCAGT TTCATATCCA TGCTCGACCT GGGGGCGCCT
CGGCGATTTG TCGACACCAT CCAGCAACCG TTGATTCTGG ATGGCAGCGA CAAGCACGAA
CTACACCGCT AA
|
|---|
| Protein sequence | MIETRLLRQF IAVAEELHFH KAAIRLHMAQ PPLSQAINRL EEKLGFSLFL RNKRGVKLTA
AGMAFLETAY RTLKELEQGI EYARNVSEGI CGKLTITAIS IAYYESLLNT LKKFREIYPN
VRLTIREMPS ASQAKALMAG EADIGFMRKL PMPPDTIESR LLLNEQIVMA LPANHAKAHQ
PMVDLRDFAE EDFVFTPQAL GSGYHSQLIA LCESAGFYPK VVQEAAQIHT LIGLVACGFG
VALVPESIAY STLRERVQFR PIRPIKDQPT PTMGLYMNWN TQNASPALGS FISMLDLGAP
RRFVDTIQQP LILDGSDKHE LHR
|
|---|
| |