| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2681 |
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| Symbol | |
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| ID | 6111632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2965484 |
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| End bp | 2967208 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622468 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_001749542 |
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| Protein GI | 170721854 |
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| COG category | [G] Carbohydrate transport and metabolism
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCA CAGACCCATT CAAAGATAAA GTCGCCATCG TCACCGGTGC CGCCCAGGGC
CTGGGCCTGG ATTACGCCAT GGCGCTGGCC GCGCGGGGAG CGCGGGTAGT CATCAGCGAC
CTGGGCACTG ATCGCTCGGG CGAAGGTCAG AACCCGGCGG CGGTCAGCGT CGCACTCGAA
ACCCTGCGGG GCCAGGGTTT TGATGTGGTC GCTCATGTCG GCCACCTGGA AAACGAAGAA
GAATGCCGAG AACTGGTGGA ACTGGCCATC GCGCATTTCG GCGCGCTGGA TATTCTCATC
CACAACGCCG GCTGGGTCGA TTACCAAGGC ATCGAGACAC AGGAACAGGC GTTTCTCGAT
CGCGCACTGG GCATCAGCGT GCACGCCCCG GTGTGGCTCG CCAAGCATGC CTGGAAGCAC
CTCAAGCAAG CCGAGGCACC ACGCATAGTC CTCACCACCT CGGACCGCGC CATGTATCAG
CGCTATGCCC AGCCAGGCCT GGTCGCGTAC TCGGCGGGCA AGATGGCCCA GGTGGGCATC
ATGAACGCAT TGAGCATGGA AGGGCTGGAA CACGGCATCC TGGTCAATGC GGTCTCGCCA
GTGGCCAAAA CCCGTATGTG GGGCGTGACC CAGCCGCCGG AAGAACTCAA GCCGCAATGG
GTGACACCGG GCGTGCTGTA CCTGGCCAGT GCGCTTTGCC GGGATACCGG GTACATCCTG
CGTGCCAGCA ATGGCCAGTT CACCGCCACG CGCTTCAGCG AGAACAGCGG CGTGAGCTAC
CCGCGTGACC TGGCGCGGGT AGAGGCTTCG AGCCTGGGCG AAGTGGCTGA ACGCTGGAGC
CTCATCAAGG AATGTCATTA CGTACCGACC AAGGTCGCCA ACACCCGTGC CGACCTTGGT
GAAAGCCCTG TGTGGGATGC GCGCACGGGT GCGTTGTATT TCATCGATAT TACCGGCGGG
CGGATTCACC GGCTGTTACC GGATGGCGAG GTCGAGAACC TTTATGAATC CGCTGCACGT
ATCGGTGCGT TGGCACTGAC CGACCAGGGC AACCTGATCT TCACCGAAGA TGCCAGCGTT
GCCATTCTGG ATATGTCGTC TTGCAAGGTG CGCCAGTACT CGGCGCCGGT GCATCATCGC
CCGAGTTACC GCTTCAATGA CGGTACCTGC GACCCCCAGG GGCGCTTCGT CACCGGCCTG
ATGGATGAGG GCCCAAGTGG CAAGACCGGT GCGCTGCTGC GTTTCGATGG CGAACTGCAC
GATGTGGTGA TCCATGACGG CATGGCGTTG CCCAATGGCA TTGCCTGGTC GGCCGATGGC
CAGACCGTTT TCTTCGTCGA CTCCGCTGCA CGCTCGATCT ACCGTGCCGA GTATCTGCCC
GAAGGGCGGC TGGAGCAGGT CAGCCTGTTT GCCGAGACGC CTGCCGAACT GGGGCGCCCT
GACGGTATCG CGCTGGATCG TGAAGGCGGG TTATGGGTGT GTCAGTTCAA TGGCAGCTGC
CTGCTGCGCT ATGACCGCAA CGGCCATTTG ACCGAGCAGG TGGTGATGCC GGTACCGCGC
CCGACCAGTT GCTGTTTCGG TGGCGATGGC ATGGGTACGC TGTACATCAC CACGGCACGG
GTCGGCATGT CGCCGACAGA ACTGCGCCAC TACCCGGACG CTGGCGACCT GTATGCGATT
CGCCCGGAAG TGGGCGGCAT TCCCCGCTAC GCGTTCAAGG AATAA
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| Protein sequence | MPSTDPFKDK VAIVTGAAQG LGLDYAMALA ARGARVVISD LGTDRSGEGQ NPAAVSVALE
TLRGQGFDVV AHVGHLENEE ECRELVELAI AHFGALDILI HNAGWVDYQG IETQEQAFLD
RALGISVHAP VWLAKHAWKH LKQAEAPRIV LTTSDRAMYQ RYAQPGLVAY SAGKMAQVGI
MNALSMEGLE HGILVNAVSP VAKTRMWGVT QPPEELKPQW VTPGVLYLAS ALCRDTGYIL
RASNGQFTAT RFSENSGVSY PRDLARVEAS SLGEVAERWS LIKECHYVPT KVANTRADLG
ESPVWDARTG ALYFIDITGG RIHRLLPDGE VENLYESAAR IGALALTDQG NLIFTEDASV
AILDMSSCKV RQYSAPVHHR PSYRFNDGTC DPQGRFVTGL MDEGPSGKTG ALLRFDGELH
DVVIHDGMAL PNGIAWSADG QTVFFVDSAA RSIYRAEYLP EGRLEQVSLF AETPAELGRP
DGIALDREGG LWVCQFNGSC LLRYDRNGHL TEQVVMPVPR PTSCCFGGDG MGTLYITTAR
VGMSPTELRH YPDAGDLYAI RPEVGGIPRY AFKE
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