| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2676 |
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| Symbol | |
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| ID | 6111627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2958476 |
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| End bp | 2960224 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622463 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001749537 |
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| Protein GI | 170721849 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAC AAGAGAACGT TGAAACACCG CCGCTCGGCG TCACCGACCC GTCCAAGACT
GCCGAGGCCA GGCAGGACCG CCACCTTGAA GGCAAGCTCG ACTGGGCGGT ATTCGGCGTC
ACCAGCTTGC TGGCGATCGC CTTCATCACC TGGGGTGTTG TCAACCAAGC CAGCCTCGCC
GCGAGCGCTA CCACTGCGCA ATCTTGGGTC ATCGTCAATT TCGGCTGGTT TTTCGTCCTG
ACGTCTACCG TGTTCGTCAT CTTCGTGCTG TGGCTGGCCG CCAGCCGCTA CGGCAGGATC
CCTCTCGGGC GCGACGGCGA AGCACCGGAA TTTCGCACGA TCTCCTGGGT TGCCATGATG
TTCAGCGCGG GCATGGGCAT CGGCCTAATG TTCTTCGGCG TCGCCGAGCC ACTGTCACAC
TACATTTCAC CACCGCCCGG CACTGCCGCT GGCCAATCCG ACGAGGCACT GCAGGTGGCG
ATGGCGACCA CGCTGTTCCA CTGGTCGCTG CACCCCTGGG CAATGTACGC CATCGTCGGG
CTGGCAATTG CCTATGGCAC GTTCCGCCGC GGCCGTTCGC AATTGATTTC TACCGCGTTC
CGGCCCTTGA TCGGCAAGCA TGCCAACGGT CCTGTCGGGC GGGTGATCGA CATGATGGCG
ATCTTCGCCA CCCTGTTCGG TTCAGCGGCT TCGCTGGGGC TCGGCGCCTT GCAGATTGCG
GGCGGGTTGG AATACAACGG CTGGATCGAA CAGCCCGGCA AGCTGTTCTA CATCACCATC
ATCACCTTGT TGACCATTGC CTTCGTTGCT TCGGCCGTGT CTGGCATCGG CAAAGGTATT
CAGTGGCTGT CCAACACCAA CATGGTACTG GCGTTGGCAC TGGCGCTGTT CGTCTTCCTG
GTGGGGCCGA CGCTGTTGAT GCTCAACCTG TTGCCGACTT CGATCGGTGT CTACATCAAG
TTGCTGCCCG AGATGATGGC GCGCACCAGC GCCAGTGGTG GTGATGCGAT GGACAGCTGG
CTGGCCGGCT GGACCGTATT CTACTGGGCC TGGTGGATTT CCTGGACGCC CTTTGTGGGT
ATGTTCATCG CCCGCATCAG CCGCGGGCGC AGCATCCGCC AGTTCGTCAG CGGCGTGTTG
CTGGTGCCAG GCCTGGTCAG CCTGGTGTGG TTCAGCGTTT TTGGCGGCGC CGGCATCGAT
GCCCTGCGCG AAGGCAGCTT CGCACTCGTC GACGGTGCGG TGAACAGCAA CCATGCCCTG
TATCAGTTGC TCGACAGCTA CCCCTGGGCT TCGGCCACTT CGGTGCTGGT CATGATCCTG
GTGGCGATCT TCTTCGTCTC CGGCGCAGAT GCGGCATCGC TGGTGATGGG TACCTTGTCC
GAGCACGGCA CCACGCAACC CTCGCGCGCA ACAGTGATTT TCTGGGGGGC ACTGACCGGG
ACCGTCGCGG CCATCATGCT CGCGCTGGGC GACCCGGGTA ACCCCGGGGA AGCGCTTACC
GGCCTGCAGA ACCTGACCAT CGTCGTAGCG TTGCCGTTTG TGGTGGTCAT GGTGCTGCTG
TGCCTGGCGC TGTACCGTGA CCTGCGCAAG GATCCGATGA TGCTGCGCCA CCTGCGCGGC
AGCGAGCTGA TCGAAAAGGC CGTGCTGTAC GGCGCCGTCA AGCACGGCGA AGAGTTCTAC
ATCGTGGTGC AGGAGAAGAA ATCCTCGCTC AAGCCGGCAC CCAGGAAGGC CCAGGTGACG
GAGCCATGA
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| Protein sequence | MATQENVETP PLGVTDPSKT AEARQDRHLE GKLDWAVFGV TSLLAIAFIT WGVVNQASLA
ASATTAQSWV IVNFGWFFVL TSTVFVIFVL WLAASRYGRI PLGRDGEAPE FRTISWVAMM
FSAGMGIGLM FFGVAEPLSH YISPPPGTAA GQSDEALQVA MATTLFHWSL HPWAMYAIVG
LAIAYGTFRR GRSQLISTAF RPLIGKHANG PVGRVIDMMA IFATLFGSAA SLGLGALQIA
GGLEYNGWIE QPGKLFYITI ITLLTIAFVA SAVSGIGKGI QWLSNTNMVL ALALALFVFL
VGPTLLMLNL LPTSIGVYIK LLPEMMARTS ASGGDAMDSW LAGWTVFYWA WWISWTPFVG
MFIARISRGR SIRQFVSGVL LVPGLVSLVW FSVFGGAGID ALREGSFALV DGAVNSNHAL
YQLLDSYPWA SATSVLVMIL VAIFFVSGAD AASLVMGTLS EHGTTQPSRA TVIFWGALTG
TVAAIMLALG DPGNPGEALT GLQNLTIVVA LPFVVVMVLL CLALYRDLRK DPMMLRHLRG
SELIEKAVLY GAVKHGEEFY IVVQEKKSSL KPAPRKAQVT EP
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