| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2667 |
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| Symbol | |
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| ID | 6111618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2950905 |
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| End bp | 2952473 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622454 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001749528 |
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| Protein GI | 170721840 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.548675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCGG GCGGAAAACA GGACGAAGAC GGGCTCTTCA CCGTAACCGG TGAGGCTCGC
GCGGTGGCGC TGTTCCGCCT GGTGCTGTCG TTCATGGCGG TTGTGCTGCT GACCTTCGTA
TCGATCGAAG GGTGGCGTAT CTGGCGCGAC TACAGGCAGG CTTCCATCAA TGCCGAGAAT
ATTGTCAGCA ACCTGGCCAG GGCCACGGCG CAGCACGCCG AAGATGCCAT TCGCCAGGTG
GACGCGATTA CCGCTGTGCT GGCCGAGCGC CTTGAAGGCG ATGGTTTCGA TCATCTCGAT
CGCCCCCGCT TGCACGCCCT TCTGGCACAA CAGAAAACGA TCATGCCGCA ACTGCACGGT
TTGTTCGTAT ACGGGCCGGA TGGCAGCTGG ATCGTCACCG ACCAGGCTTC CATCCCGGCA
AAGGCCAACA ATGCCGACCG TGACTACTTT GCTTACCACC AGACCCACAC TGACCGTGAG
GTGCGTATCG GTTCGGTGGT ACGCAGCCGC TCCACCGGTG ACCTGATCAT TCCAATCTCG
CGCAGGCTGG AAAATCGCGA TGGCAGCTTT GCCGGGGTGT TGCTCGGCAC CATCAAGGTG
GACTGGTTCG TGCGCTATTA CGGTGATTTC AAGATCGACG AGCGAGGCGC CCTGGTGCTG
GCCAAGCGAG ACGGCACGAT CCTGGTACGC CGGCCGTTCG TGGAACACGT AGTCGGCCAC
AGCCTTGCAA ACAGCGAAGT CTTCCGACAT CACCTGCCTC ATGCGAGCGA AGGGCTGGTT
GAAGCGGTGG CGGTCGTTGA TGGTACGCCC CGCCTGTACG CTTATCGCGC CCTGACGCGA
TATCCGTTGG TGGTAGAGGC GGGCTTGTCG CGTGAGTCGA TCATTGCGCC CTGGCGGCAA
GATGTCATCA AGTCAGCCTT CATTCTGCTG CTTTTGCTGG TTGGGTTGAG TGGCTTCGGC
TGGGTGGTAT TGCGCCAGTT GCGTGAGCGG ATCGCTATCG AAAGGGCGCT GCACCAGGCC
CACCAGACCC TCAGGTCGCT GGCCCTGACC GACAGCCTGA CCGGGCTGGG AAACCGCCGC
AGGCTGGATG CGGTACTGGA TGCGGAAATC CGCCGGGCGC GGCGACTGGG GCATGCGGTG
GCGCTGGTAA TGATCGATCT TGATTTTTTC AAACTGTACA ACGATCGCTA TGGCCACCCT
GCGGGAGATC AATGCTTGCG CCGCTTTGCC GAATTGCTGC AGCAGGTATT GAAGCGCCCG
GCGGATCTGG CGGTGCGTTA TGGTGGAGAG GAGTTCACGG TTTTACTTCC TGACACTGAC
GTAAAGGGGG CCGAACAGGT TGTCGATGAA ATTCTGCAAC TGCTACGCCG CCTGATGATC
GAGCATGCCG GCAGCCCGCT TGGCCTTGTA TCTGCCAGTG CCGGGATTGC TGTCGGGCAT
CCGGCAGTGG ATGCGAGCAG CCCCGAAAGC CTTATGTCTG CGGCTGACGG GGCGCTGTAT
CAGGCCAAGC GCCAAGGGCG CGATGGCTAT GCCGTCGCTG ATCGCATGGC GATGAGTGCT
GGTAATTAA
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| Protein sequence | MGAGGKQDED GLFTVTGEAR AVALFRLVLS FMAVVLLTFV SIEGWRIWRD YRQASINAEN
IVSNLARATA QHAEDAIRQV DAITAVLAER LEGDGFDHLD RPRLHALLAQ QKTIMPQLHG
LFVYGPDGSW IVTDQASIPA KANNADRDYF AYHQTHTDRE VRIGSVVRSR STGDLIIPIS
RRLENRDGSF AGVLLGTIKV DWFVRYYGDF KIDERGALVL AKRDGTILVR RPFVEHVVGH
SLANSEVFRH HLPHASEGLV EAVAVVDGTP RLYAYRALTR YPLVVEAGLS RESIIAPWRQ
DVIKSAFILL LLLVGLSGFG WVVLRQLRER IAIERALHQA HQTLRSLALT DSLTGLGNRR
RLDAVLDAEI RRARRLGHAV ALVMIDLDFF KLYNDRYGHP AGDQCLRRFA ELLQQVLKRP
ADLAVRYGGE EFTVLLPDTD VKGAEQVVDE ILQLLRRLMI EHAGSPLGLV SASAGIAVGH
PAVDASSPES LMSAADGALY QAKRQGRDGY AVADRMAMSA GN
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