Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2644 |
Symbol | |
ID | 6111595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2929406 |
End bp | 2930323 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641622431 |
Product | hypothetical protein |
Protein accession | YP_001749505 |
Protein GI | 170721817 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0027235 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.411348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGAGA TCCGCATCGG CATATCCGGA TGGCGCTATG GCCCCTGGCG CAAGGACTTC TACCCCAAGG GGCTGCGGCA GGATAACGAA CTGGCATTTG CCTCGCGCGC CGTGAACAGC ATAGAAATAA ACGGGTCGTT CTATAGCCTG CAAACACCGG AACGCTATGA GCGCTGGCGG GACGATACGC CGGAAGACTT CGTCTTTTCA GTCAAAGGGC CCCGCTATAT CACGCATGGG CGGCGCCTCA AGGACATCGA AGAGCCGCTG GCTAACTTCT TTGCATCTGG CCTTTTATCG CTGGGCGATA AGCTGGGGCC GGTTCTGTGG CAGTTCCCGC CGAACATGAA ATTCGATGAG GATCGCTTCG AGCGCTTCCT CGCGCTATTG CCTCACGACC GCCAGGCGGC GAGCGCCTGT GCCCGCAACT GCGCGGAGCG TTTACGGGGC AATGGCGGGA CGGCCATCGA CGGCAATGCA CGCATTCGCC ACGCAGTGGA AATACGTAAT GAGAGCTTTC TGTGCGAGGC GTTCGTCCGG ATGCTGCGCA AGTACCGGGT GGCGCTCGTG GTCGCCGACA GCGCGGGCAA GTGGCCCTAT GTCGAAGATG TGACCGCCGA CTTCGTCTAC CTGCGTCTGC ACGGCGATGT CGAGCTTTAC AGCAGCGGAT ATACAGCCCG CGCATTGCGC CGCTGGAAGC AGCGTATCGA ATGCTGGAGC CGCGGCGCAC AACCAGACGA TGCCCACCTG ATCATCGATC AGCCGCCACC TCGGCGTGCC TCACGGGATA TCTATTGCTA CTTCGATAAC GACCAGAAGG TACATGCCCC ATACGACGCA CGCCGTCTAC TGGACAAAAT GGATCTGAAT GGCCACTTGG TGACAGAACC GGGTGTCACA CCGCAGGTGG AATTGTGA
|
Protein sequence | MSEIRIGISG WRYGPWRKDF YPKGLRQDNE LAFASRAVNS IEINGSFYSL QTPERYERWR DDTPEDFVFS VKGPRYITHG RRLKDIEEPL ANFFASGLLS LGDKLGPVLW QFPPNMKFDE DRFERFLALL PHDRQAASAC ARNCAERLRG NGGTAIDGNA RIRHAVEIRN ESFLCEAFVR MLRKYRVALV VADSAGKWPY VEDVTADFVY LRLHGDVELY SSGYTARALR RWKQRIECWS RGAQPDDAHL IIDQPPPRRA SRDIYCYFDN DQKVHAPYDA RRLLDKMDLN GHLVTEPGVT PQVEL
|
| |