Gene PputW619_2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2638 
Symbol 
ID6111589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2922967 
End bp2924199 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content64% 
IMG OID641622425 
Productouter membrane porin 
Protein accessionYP_001749499 
Protein GI170721811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00757787 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.107992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA CTCGCTTCTC TTGCCTCACC TGGCTTGCCA CGCTCGCCCT GCCCTTGCCG 
GCCTTGGCGG ACTTCGTCGG CGACAGCCAT GCGCGCCTGG AACTGCGCAA CCACTACCTC
AACCGCGACT TCCGCCAGAG CAATGCGCCG CAGGCCAAGG CCGAGGAATG GGGCCAAGGC
TTTACTGCCC GCCTGGAATC GGGCTTCACC GAAGGCCCGG TAGGCGTCGG CGTGGATGCC
ATGGGCCAGT TGGGCGTCAA GCTCGACAGC AGCCGTGACC GCCGCAACAC CGGCCTGCTG
CCGTTTGGCC CGAACAGCCA CGAGCCTGTC GATGACTACA GTGAGTTGGG CCTGACCGGT
AAAGTGCGCG TGTCCAAGAG CACCCTGCGC CTGGGCACCT TGCAGCCGAT TCTGCCGGTA
GTGGTTTACA ACGACACGCG ACTGCTGGCG TCGACCTTCC AGGGCGGGCT GCTGACCAGC
CAGGAACTCG ACGGCCTGAC CGTCAACGCC GGACGCTTGA CCAAGGCCAA CCTGCGCGAC
TCTTCGGGCC GCGACGACAT CGGCTACGGC GCCGCCAGCA GCGACCATCT GGACTTCGGT
GGCGGCAGCT ATGCCATTAC CCCACAGACC AGCGTCAGCT ACTACTACGC CAAGCTCGAA
GACATCTACC GCCAGCAGTT TGTCGGCCTG GTCGACACCC GCCCGCTGGG CGAAGGCCTT
AGCCTGCGTA GCGACCTGCG GTACTTCGAC AGCCGCAATG ATGGCGCCGA ACGTGCCGGC
AACATCGACA ACCGCAACTT CAACGCCATG TTCACCCTCG GCGTCAGGGC ACACAAATTC
ACCGCCACCT GGCAACAGAT GTCCGGTGAC AGCGCCTTCC CCTTCGTCAA CGGCGGCGAC
CCGTTCACCG TGAACCTGGT GACCTACAAC ACCTTCACCC GTGCCGGGCT CGATTCGTGG
CAGGTGCGCT ATGACTACGA TTTCGTTGCC ATGGGCATTC CCGGCCTGAG TTTCATGACC
CGTTACACCG ACGGACGCCA CGCCGAGACC GCGACCGTCA GCAACGGCCG TGAGCGCGAG
CGCGATAGCG ACCTCACCTA TGTCATCCAG AGCGGTCCGT TCAAAGACGT CAGCCTGCGC
TGGCGCAATG TCACCTTCCG TTCCGGCAAT GGCCTGACCA ATGCCGTGGA CGAAAACCGC
CTGATCATCG GCTACACCCT GGCGCTGTGG TAA
 
Protein sequence
MNRTRFSCLT WLATLALPLP ALADFVGDSH ARLELRNHYL NRDFRQSNAP QAKAEEWGQG 
FTARLESGFT EGPVGVGVDA MGQLGVKLDS SRDRRNTGLL PFGPNSHEPV DDYSELGLTG
KVRVSKSTLR LGTLQPILPV VVYNDTRLLA STFQGGLLTS QELDGLTVNA GRLTKANLRD
SSGRDDIGYG AASSDHLDFG GGSYAITPQT SVSYYYAKLE DIYRQQFVGL VDTRPLGEGL
SLRSDLRYFD SRNDGAERAG NIDNRNFNAM FTLGVRAHKF TATWQQMSGD SAFPFVNGGD
PFTVNLVTYN TFTRAGLDSW QVRYDYDFVA MGIPGLSFMT RYTDGRHAET ATVSNGRERE
RDSDLTYVIQ SGPFKDVSLR WRNVTFRSGN GLTNAVDENR LIIGYTLALW