| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2627 |
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| Symbol | |
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| ID | 6111578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2912221 |
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| End bp | 2913738 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641622414 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001749488 |
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| Protein GI | 170721800 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.341163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0714508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAC TTGAAAGTAA CGCCCAGGTC GCGGTGATCG GCGCCGGTGC GATGGGGGCC
GGCATCGCCC AGGTGGCCGC CCAGGCGGGG CACCCAGTTT GCCTGTATGA CAATCGCCCA
GGCGCTGCGG CCTTGGCCGT GCAAGGCATC GACCGTCAAC TCGGCCGCCT GGTCGAAAAA
GGCAAGCTCG ACGCTGCCGC ACGCCAGGCG ATCAGTGCGC GCTTGCAGCC CGTGGAAACG
CTCGACGCAC TGGCCGATGC GCAGCTGGTA ATCGAAGCGA TCGTCGAAAA CCTGCAGATC
AAACAGGCAC TCTTGCAGCA GCTTGAAGCC CTTTGCAGCG ACAGCTGCAT ATTGGCCAGC
AACACCTCAT CGCTGTCGAT CACCAGCCTG GCCGCCGGCC TGCGGCGGCC AGAACGGGTG
GTCGGCATGC ACTTTTTCAA CCCTGCGCCG CTGATGGCGT TGGTCGAGGT CGTTTCAGGC
CTGGCCACTG CCCCCGCTTT GGCCGCCACG CTGTACGACA CGGCCACTGC CTGGGGCAAG
CAGCCGGTGC ATGCGCGTTC AACGCCGGGC TTCATCGTCA ACCGGGTGGC GCGGCCGTTT
TATGCCGAGA GCCTGCGCCT GTATCAGGAA GGCGCCGCCG CCTGCGCAAG CCTCGATGCG
CTGATGCGTG ACGCCGGTGG TTTCCGCATG GGCGCTTTCG AGCTGACCGA CCTGATCGGC
CACGATGTCA ATTACGCCGT GACCTGCTCG GTATTCGACG CCTTTTATGG TGACTTCCGT
TTCCAGCCCT CGCTTGTACA GAAAGAGCTG GTGGATGCCG GGCGTCTTGG GCGCAAGAGC
GGCCAGGGTT TCTACGATTA CAGCGAAGGT GCGCTGCGGC CGCAGCCCGC CGAGGTGCAA
AGCACGGCGC GTGTCGAGTG CTGCGTGGTC GAAGGCAGCC TGGGCGTTAT GCAGCCCTTG
CTACAGCGCA TCCAGGCCAG CGGCGTCCAG GTCACTGAGC GCCCGGGCAG TGGTCTGCTG
CGGGTAGGTG ATGCCACCCT GGCGTTGTCT GACGGCCGCC TCGCCAGCCA ACGCGCGCGT
GAAGATGGGC TGCGCAACCT GGTGCTGGTG GACCTCGCGC TGGATTACAG CAAGGCCGAA
CGGATTGCCA TCAGCACTTG CCCCGACACC ACCCCAGAGG CGTGCGAACA CGCCGTGGCG
TTGTTGCGCC AGGCGGGCCT GAAGGTTTGC CTGATAGCCG ACCTGCCGGC CCTGGTGGTG
TTGCGCACCG TCACCACACT CGCCAACGAA GCTGCCGATG CCGTGCTGCA AGGCGTCGGC
TCGGCAGCCG ACATCGACCT GGCCATGCGC GCTGGGGTCA ATTACCCGCG CGGCCCGTTG
GCCTGGGCCG AGCAGATCGG CATCGGCTAC ACCCTGCGCG TGCTGGACAA CCTGCAGCGC
TGCTACGGCG AGACCCGCTA CCGCCCTTCG CTGCTGCTGC GCCGCGTACA TGCCCAAGGA
GGCCGACTGC ATGACTGA
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| Protein sequence | MSALESNAQV AVIGAGAMGA GIAQVAAQAG HPVCLYDNRP GAAALAVQGI DRQLGRLVEK
GKLDAAARQA ISARLQPVET LDALADAQLV IEAIVENLQI KQALLQQLEA LCSDSCILAS
NTSSLSITSL AAGLRRPERV VGMHFFNPAP LMALVEVVSG LATAPALAAT LYDTATAWGK
QPVHARSTPG FIVNRVARPF YAESLRLYQE GAAACASLDA LMRDAGGFRM GAFELTDLIG
HDVNYAVTCS VFDAFYGDFR FQPSLVQKEL VDAGRLGRKS GQGFYDYSEG ALRPQPAEVQ
STARVECCVV EGSLGVMQPL LQRIQASGVQ VTERPGSGLL RVGDATLALS DGRLASQRAR
EDGLRNLVLV DLALDYSKAE RIAISTCPDT TPEACEHAVA LLRQAGLKVC LIADLPALVV
LRTVTTLANE AADAVLQGVG SAADIDLAMR AGVNYPRGPL AWAEQIGIGY TLRVLDNLQR
CYGETRYRPS LLLRRVHAQG GRLHD
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