| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2623 |
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| Symbol | |
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| ID | 6111574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2908670 |
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| End bp | 2909674 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622410 |
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| Product | PaaX family transcriptional regulator |
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| Protein accession | YP_001749484 |
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| Protein GI | 170721796 |
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| COG category | [K] Transcription |
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| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
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| TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.312733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0873289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGG TGGTGACTGG CAATGGCCAG GCGGCACGGC GGGCAGGTAT AGTCGGGGCT
CCATCGGCTT ACAGTTCCCC CATGAGCAGC CTTGCCCCCC TCAATACCTT GATCACCCGC
TTCCAGGAGC AGACGCCGAT CCGCGCGAGC TCGCTGATCA TCACCCTGTA TGGCGACGCC
ATCGAGCCGC ATGGTGGCAC GGTCTGGCTG GGCAGCCTGA TCAACCTGCT GGAGCCGATC
GGCATCAACG AACGGCTGAT CCGCACCTCG ATCTTCCGCC TGACCAAGGA AGGCTGGCTG
ACCGCCGAGA AAGTCGGCCG GCGCAGCTAT TACAGCCTCA CCGGCACCGG CCGGCGCCGT
TTCGAAAAAG CTTTCAAGCG TGTTTACAGC GCGAGCCTGC CAGCCTGGGA CGGCGCCTGG
ACGCTGGTGT TGCTGTCGCA GCTGGAGGCC AGCAAGCGCA AGGCCGTGCG CGAGGAGCTG
GAGTGGCAGG GCTACGGTGC CATCGCCCCG AACGTACTGG GGTGCCCGCG CGCTGATCGT
GCCGACCTGG CGACCACCTT GCGCGAGCTG GACGCCACTG ACGACAGCAT CGTCTTCGAA
ACCCACACCC AGGAAGTACT GGCCTCAAAG GCCATGCGCG CCCAGGTTAG GGAAAGCTGG
CGGATCGAGG AACTGGGCGA GCACTACAGC GAGTTCATCC GCTTGTTCCG ACCGCTGTGG
CAGGCACTCA AGGAGCAGAA GGAACTCGAT GCCCAGGACT GCTTCCTGGC GCGCACCTTG
TTGATTCATG AGTACCGTCG GCTGCTGCTG CGCGACCCGC AGTTGCCGGA TGAGCTGCTG
CCTGGGGACT GGGAAGGCAG GGCTGCTCGC CAGTTGTGCC GTAACCTCTA TCGTCTGGTG
TGGGGCAGGG CGGAAGCGTG GCTGGGGAGC GCACTGGAGA CGGCAGATGG GCCGTTGCCG
GATGTTAACG AGAGCTTCTA CAGGCGGTTT GGTGGTTTGG GCTGA
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| Protein sequence | MSLVVTGNGQ AARRAGIVGA PSAYSSPMSS LAPLNTLITR FQEQTPIRAS SLIITLYGDA
IEPHGGTVWL GSLINLLEPI GINERLIRTS IFRLTKEGWL TAEKVGRRSY YSLTGTGRRR
FEKAFKRVYS ASLPAWDGAW TLVLLSQLEA SKRKAVREEL EWQGYGAIAP NVLGCPRADR
ADLATTLREL DATDDSIVFE THTQEVLASK AMRAQVRESW RIEELGEHYS EFIRLFRPLW
QALKEQKELD AQDCFLARTL LIHEYRRLLL RDPQLPDELL PGDWEGRAAR QLCRNLYRLV
WGRAEAWLGS ALETADGPLP DVNESFYRRF GGLG
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