Gene PputW619_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2578 
Symbol 
ID6111529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2862407 
End bp2864476 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content61% 
IMG OID641622367 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001749441 
Protein GI170721753 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.800994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCG AAAGTCCTGG CATTCACAGC CCTACTGGCG CATCTGCAGC GCAGAGCCAG 
GAACATGCGT TTCCAACCAA TACTGCAGAG CGATTGCAGC TGGCGCTCGA TGCTGGCGCG
ATCATCGGCA CCTGGTTATG GGATATCCCC AATAATCAGG TCACAGCCGA TGAACGCTTC
TCCCGATCCT TCGGGCTGCC CGCCGACAGG TGCATGGCAG GCATCCCGAT TGAAGAAGCG
TTTGCCTCGA TACACCCGCA CGATCGTGAG CGTGTCTGGG CCGACATCCA GCAAGTGATG
GGCCGCGGTG GTGCATTCAG GTGCGAATAC CGGGTTAGAC ACGATGATGG CGACTATCGA
TGGGTCGAGG CCAATGGCCG TGCACAGCTC GACCCGCAAG GTGTGGCTGT GCGGTTCCCT
GGCATACTCA TGGATATCGA ATCGCGCCGC TCGGCAGAGG CTGAGCGCGA CAGGATGTCG
GCCCTGCTGC GAACATTCAC GGCAGCAGTG CCAGGGGTTG TCTATGCCAA GGACCTGGCA
GGACGCATGC TGGTGGCCAA TCATGGTGCC ACGCGACTGA TCGGCAAGCC GCCGGAGTTC
TACCTGGGAA AGACCGATAT CGAGTTCCTG GAGGACAAAG CCCAGGCTCG CCAGGTGATG
GAAACAGATC AGCGCATCAT GCACGGTGGT GTGGCCGAGC AGATCGAGGA GCGGGTCGAC
ATGCCCGATG GCTCGGCGAC TTACTGGCTT TCCATCAAGG CCCCGCTGTT GAGCGACACC
GGAGAAGTCA TGGGGCTGAT CGGGTCCTCC ATCGATGTAA CGGCCCGCAA AACTGCGGAA
TCCAAGTTGC TTGAGCTTAA CCGCACGCTG GAAGCTCGCA TTGAGCAAGC CGTTGCCGAG
CGTGAAGCGG CTCAGGCGGC GCTTCGTCAG TCACAGAAAA TGGAAGCGGT CGGCCAGCTG
ACCGGGGGGA TTGCCCACGA CTTCAACAAC CTGCTGGCGG GTATCACCGG CAGCCTGGAC
TTGATCAGGC TGCGCCTGAA GCAGGGGCAT GTCGCGGACG TGGAGCGGTA CTTGTCGGTG
GCGCAGGGGG CGGCGCAGCG CGCTGCCTCG CTCACGCACA GGTTGCTGGC CTTCTCTCGT
CGCCAGACGT TGCTGCCTGA GCATACTGAC GTGAACACCT TGATCAGCGA CATGGAAGAG
CTGATTCGTC GGACGGTCGG CCCTTCGATC AACCTGCGGG TGCAGCTCGA TGCGAAGGCC
AGCACGTGCT TGGTCGATCC GGCGCAGGTC GAAAATGCGC TGCTCAATTT ATGTATCAAT
AGCCGTGACG CCGGCGGCGC TGAGATATCT GTCAGTACGT TCAACCAGGC GCTGCAGCCA
GGGCCGGGCC TGGATCCGGA GCTGCCCCCC GGAACGTATT TGACGGTTTG CGTGGCTGAC
AATGGCATCG GGATGAATGC CGAAACACTT AGCCGCGTAT TCGAGCCCTT TTTCACGACA
AAGCCGGTTG GCGCAGGCAC CGGGCTGGGC TTGTCGATGA TCTACGGGTT CGCCAAACAG
TCAGGGGGGC AGGTGAAGAT AGAATCGCAG GAGGGCGCAG GCACCCGCGT ATACCTTCAG
TTGCCCAGCC AAGCCGCCCG AGTTGACCGA GATGAGCCTT TGCGCACTCC GGTCAAGGCA
CCACCTGCGC TTTCCGGTGC GACGGTATTG GTGGTCGACG ATGAGCCCTC GGTACGGATG
TTTGTAAGCG AAACCCTGGG CAGCTGTGGT TACGTGGTGA TTGAAGCTGC TGACAGCCTG
GCGGGCCTGC AACTGCTGCG CTCGGATACC CGCATCGATC TGTTGGTGAC GGATATAGGC
CTGCCAGGTG GGATTGACGG CCGGCAGATG ACGAAGACGG CGCGCCTTTG TAGGCCTGGG
TTGCCGGTGT TGTTCATGAC CGGGTATGCG CAGCCGCACG TCCTGGACGA GGCCCCGATG
GAAGCGCATA CGGCAGTGCT TACCAAACCG TTTTCACTTG AAGCGCTGAC CCTGAACGTC
AATGCGCTGC TTAGACACTC AAGCCGATAA
 
Protein sequence
MDRESPGIHS PTGASAAQSQ EHAFPTNTAE RLQLALDAGA IIGTWLWDIP NNQVTADERF 
SRSFGLPADR CMAGIPIEEA FASIHPHDRE RVWADIQQVM GRGGAFRCEY RVRHDDGDYR
WVEANGRAQL DPQGVAVRFP GILMDIESRR SAEAERDRMS ALLRTFTAAV PGVVYAKDLA
GRMLVANHGA TRLIGKPPEF YLGKTDIEFL EDKAQARQVM ETDQRIMHGG VAEQIEERVD
MPDGSATYWL SIKAPLLSDT GEVMGLIGSS IDVTARKTAE SKLLELNRTL EARIEQAVAE
REAAQAALRQ SQKMEAVGQL TGGIAHDFNN LLAGITGSLD LIRLRLKQGH VADVERYLSV
AQGAAQRAAS LTHRLLAFSR RQTLLPEHTD VNTLISDMEE LIRRTVGPSI NLRVQLDAKA
STCLVDPAQV ENALLNLCIN SRDAGGAEIS VSTFNQALQP GPGLDPELPP GTYLTVCVAD
NGIGMNAETL SRVFEPFFTT KPVGAGTGLG LSMIYGFAKQ SGGQVKIESQ EGAGTRVYLQ
LPSQAARVDR DEPLRTPVKA PPALSGATVL VVDDEPSVRM FVSETLGSCG YVVIEAADSL
AGLQLLRSDT RIDLLVTDIG LPGGIDGRQM TKTARLCRPG LPVLFMTGYA QPHVLDEAPM
EAHTAVLTKP FSLEALTLNV NALLRHSSR