| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2578 |
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| Symbol | |
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| ID | 6111529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2862407 |
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| End bp | 2864476 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622367 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001749441 |
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| Protein GI | 170721753 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.800994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCG AAAGTCCTGG CATTCACAGC CCTACTGGCG CATCTGCAGC GCAGAGCCAG
GAACATGCGT TTCCAACCAA TACTGCAGAG CGATTGCAGC TGGCGCTCGA TGCTGGCGCG
ATCATCGGCA CCTGGTTATG GGATATCCCC AATAATCAGG TCACAGCCGA TGAACGCTTC
TCCCGATCCT TCGGGCTGCC CGCCGACAGG TGCATGGCAG GCATCCCGAT TGAAGAAGCG
TTTGCCTCGA TACACCCGCA CGATCGTGAG CGTGTCTGGG CCGACATCCA GCAAGTGATG
GGCCGCGGTG GTGCATTCAG GTGCGAATAC CGGGTTAGAC ACGATGATGG CGACTATCGA
TGGGTCGAGG CCAATGGCCG TGCACAGCTC GACCCGCAAG GTGTGGCTGT GCGGTTCCCT
GGCATACTCA TGGATATCGA ATCGCGCCGC TCGGCAGAGG CTGAGCGCGA CAGGATGTCG
GCCCTGCTGC GAACATTCAC GGCAGCAGTG CCAGGGGTTG TCTATGCCAA GGACCTGGCA
GGACGCATGC TGGTGGCCAA TCATGGTGCC ACGCGACTGA TCGGCAAGCC GCCGGAGTTC
TACCTGGGAA AGACCGATAT CGAGTTCCTG GAGGACAAAG CCCAGGCTCG CCAGGTGATG
GAAACAGATC AGCGCATCAT GCACGGTGGT GTGGCCGAGC AGATCGAGGA GCGGGTCGAC
ATGCCCGATG GCTCGGCGAC TTACTGGCTT TCCATCAAGG CCCCGCTGTT GAGCGACACC
GGAGAAGTCA TGGGGCTGAT CGGGTCCTCC ATCGATGTAA CGGCCCGCAA AACTGCGGAA
TCCAAGTTGC TTGAGCTTAA CCGCACGCTG GAAGCTCGCA TTGAGCAAGC CGTTGCCGAG
CGTGAAGCGG CTCAGGCGGC GCTTCGTCAG TCACAGAAAA TGGAAGCGGT CGGCCAGCTG
ACCGGGGGGA TTGCCCACGA CTTCAACAAC CTGCTGGCGG GTATCACCGG CAGCCTGGAC
TTGATCAGGC TGCGCCTGAA GCAGGGGCAT GTCGCGGACG TGGAGCGGTA CTTGTCGGTG
GCGCAGGGGG CGGCGCAGCG CGCTGCCTCG CTCACGCACA GGTTGCTGGC CTTCTCTCGT
CGCCAGACGT TGCTGCCTGA GCATACTGAC GTGAACACCT TGATCAGCGA CATGGAAGAG
CTGATTCGTC GGACGGTCGG CCCTTCGATC AACCTGCGGG TGCAGCTCGA TGCGAAGGCC
AGCACGTGCT TGGTCGATCC GGCGCAGGTC GAAAATGCGC TGCTCAATTT ATGTATCAAT
AGCCGTGACG CCGGCGGCGC TGAGATATCT GTCAGTACGT TCAACCAGGC GCTGCAGCCA
GGGCCGGGCC TGGATCCGGA GCTGCCCCCC GGAACGTATT TGACGGTTTG CGTGGCTGAC
AATGGCATCG GGATGAATGC CGAAACACTT AGCCGCGTAT TCGAGCCCTT TTTCACGACA
AAGCCGGTTG GCGCAGGCAC CGGGCTGGGC TTGTCGATGA TCTACGGGTT CGCCAAACAG
TCAGGGGGGC AGGTGAAGAT AGAATCGCAG GAGGGCGCAG GCACCCGCGT ATACCTTCAG
TTGCCCAGCC AAGCCGCCCG AGTTGACCGA GATGAGCCTT TGCGCACTCC GGTCAAGGCA
CCACCTGCGC TTTCCGGTGC GACGGTATTG GTGGTCGACG ATGAGCCCTC GGTACGGATG
TTTGTAAGCG AAACCCTGGG CAGCTGTGGT TACGTGGTGA TTGAAGCTGC TGACAGCCTG
GCGGGCCTGC AACTGCTGCG CTCGGATACC CGCATCGATC TGTTGGTGAC GGATATAGGC
CTGCCAGGTG GGATTGACGG CCGGCAGATG ACGAAGACGG CGCGCCTTTG TAGGCCTGGG
TTGCCGGTGT TGTTCATGAC CGGGTATGCG CAGCCGCACG TCCTGGACGA GGCCCCGATG
GAAGCGCATA CGGCAGTGCT TACCAAACCG TTTTCACTTG AAGCGCTGAC CCTGAACGTC
AATGCGCTGC TTAGACACTC AAGCCGATAA
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| Protein sequence | MDRESPGIHS PTGASAAQSQ EHAFPTNTAE RLQLALDAGA IIGTWLWDIP NNQVTADERF
SRSFGLPADR CMAGIPIEEA FASIHPHDRE RVWADIQQVM GRGGAFRCEY RVRHDDGDYR
WVEANGRAQL DPQGVAVRFP GILMDIESRR SAEAERDRMS ALLRTFTAAV PGVVYAKDLA
GRMLVANHGA TRLIGKPPEF YLGKTDIEFL EDKAQARQVM ETDQRIMHGG VAEQIEERVD
MPDGSATYWL SIKAPLLSDT GEVMGLIGSS IDVTARKTAE SKLLELNRTL EARIEQAVAE
REAAQAALRQ SQKMEAVGQL TGGIAHDFNN LLAGITGSLD LIRLRLKQGH VADVERYLSV
AQGAAQRAAS LTHRLLAFSR RQTLLPEHTD VNTLISDMEE LIRRTVGPSI NLRVQLDAKA
STCLVDPAQV ENALLNLCIN SRDAGGAEIS VSTFNQALQP GPGLDPELPP GTYLTVCVAD
NGIGMNAETL SRVFEPFFTT KPVGAGTGLG LSMIYGFAKQ SGGQVKIESQ EGAGTRVYLQ
LPSQAARVDR DEPLRTPVKA PPALSGATVL VVDDEPSVRM FVSETLGSCG YVVIEAADSL
AGLQLLRSDT RIDLLVTDIG LPGGIDGRQM TKTARLCRPG LPVLFMTGYA QPHVLDEAPM
EAHTAVLTKP FSLEALTLNV NALLRHSSR
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