Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2571 |
Symbol | |
ID | 6111522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2853138 |
End bp | 2854103 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622360 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001749434 |
Protein GI | 170721746 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.24433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC GAATCGTCCT TTACAAGCGC CTGCCCGAGG CCCTGCTGGC GCGCCTGCAA CAGCAGGTCG AGGTGACCTG GGTGGATACC TCCGGCAGTG ATGGCCTGGC CCGGCTGCGC GATGCCTTGC CCGGTGCCCA TGGCCTGCTG GGCGCCAGTT TGCGGCTGGA CAGCAGCCTG CTGGACCTGG CGCCACAGCT TGAGGTGGTG GCCAGTGTGT CGGTTGGCGT CGACAACTAC GACGTTGCCG AGCTGACCCG CCGTGGCGTG ATGCTGACCA ACACCCCTGA TGTATTGACC GAGACCACCG CCGACACCGG CTTTGCCTTG ATCCTGGCCA CTGCCCGGCG GGTGGTGGAG CTGGCCGGCT GGGTACGTGA CGGCCATTGG CAGGCCAACC TTGGGCCGGC GCATTTTGGC AGTGACGTGC ATGGCAAGAC CTTGGGCATC GTCGGCATGG GGCGCATTGG TGAGGCCTTG GCCCGCCGTG GTGCGGCCGG GTTCGGCATG CGCGTGCTGT ACCACAGTTC GCGGGCCAAA CCAGAGGTGG AGGCCCGCTA TGGTGCCCGG TATCGCACCC TGGACGAGTT GCTGCGCGAG GCGGATTTTG TCTGTTTGAC GGTGCCCTTG AGCGCCAGCA CCGAAGGCCT GATCGGCGCA AGGGAGCTTT CGCTGATGAA GCCCGAGGCG ATCCTGGTGA ACATTGCCCG CGGGCGTGTG GTGGATGAAC AGGCACTGCT TGCGGCGTTG CAAGCCAAGC GCATCCGCGG CGCCGGGCTG GATGTGTTCG TGCAGGAGCC ACTGCCGGCC CACTCGCCGC TGTTGCAACT GGACAACGTG GTGGCCACGC CGCACATCGG CTCGGCGACC CACGAAACCC GTGAGGCCAT GGCGCGCTGT GCGGTAGAGA ACCTGTTGAG CGCGTTGGCG GGGCAGAGGC CGGCGAATCT GGTGAATGAG GTCTAG
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Protein sequence | MKKRIVLYKR LPEALLARLQ QQVEVTWVDT SGSDGLARLR DALPGAHGLL GASLRLDSSL LDLAPQLEVV ASVSVGVDNY DVAELTRRGV MLTNTPDVLT ETTADTGFAL ILATARRVVE LAGWVRDGHW QANLGPAHFG SDVHGKTLGI VGMGRIGEAL ARRGAAGFGM RVLYHSSRAK PEVEARYGAR YRTLDELLRE ADFVCLTVPL SASTEGLIGA RELSLMKPEA ILVNIARGRV VDEQALLAAL QAKRIRGAGL DVFVQEPLPA HSPLLQLDNV VATPHIGSAT HETREAMARC AVENLLSALA GQRPANLVNE V
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