| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2565 |
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| Symbol | |
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| ID | 6111516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2845664 |
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| End bp | 2847448 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622354 |
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| Product | gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001749428 |
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| Protein GI | 170721740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.339235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATG CAATGAAGAA GGTCGATGCG GTGATCGTCG GTTTCGGCTG GGCGGGCGCC
ATCATGGCCA AGGAACTCAC CGAGGCCGGG TTGCAGGTGG TCGCGCTGGA GCGCGGGCCG
ATGCAGGACA CCTACCCCGA AGGCAGCTAC CCGCAGGTCA TCGATGAGCT GACCTACAGC
GTGCGCAAGA AGCTGTTCGT GGATGTCTCC AAAGAAACCG TCACCATCCG CCACAGCGTC
AACGATGTCG CGCTGCCCAA CCGCCAGCTC GGTGCCTTCC TGCCCGGCAA GGGCGTGGGC
GGCGCAGGCC TGCACTGGTC CGGCGTGCAT TTTCGTGTAG ACCCGATGGA GCTGCGCATG
CGCAGCCACT ACGAAGAGCG CTACGGCAAA CGCTTCATTC CTGAAGACAT GACGATCCAG
GACTTTGGCG TGAGCTACGA GGAGCTCGAG CCCTGCTTCG ACTTCGCCGA GAAGGTCTTC
GGCACCTCGG GCCAGGCCTG GACCGTGAAC GGCAAGGTGG TCGGCGAAGG GAAGGGTGGC
AACCCTTATG CACCGGACCG CTCCAACCCC TTCCCGCTGG TGTCGCAGAA GAACGTGGTG
TCTGCGCAGC TGTTCCAGAA GGCAACCGCC AGCCTGGGCT ACAAGCCCTA CAACCTGCCT
TCGGCCAACA CATCAGGGCC CTACACCAAC CCTTATGGGG CGCAGATGGG GCCGTGCAAC
TTCTGTGGTT TCTGCAGCGG GTACGTGTGC TACATGTACT CCAAGGCGTC ACCCAACGTG
AACATCCTGC CGGCGCTGCG CCAGGTGCCC CATTTCGAGC TGCGGGCCAA TGCCCATGTG
CTGCGGGTGA ACCTGGACGA CAGCAAGCGC AAGGCTACCG GGGTGACCTA CATCGATGCC
CAGGGGCGGG AAGTGGAGCA GCCGGCTGAC ATCGTCATCC TTGCCGCGTT CCAGTTCAAC
AACGTGCGCC TGATGCTGCT GTCGGGCATC GGCAAACCCT ATGACCCGAT CAAGAACGAA
GGGGTTGTGG GGCGCAACTT CGCCTACCAG AACATGGGCA CGGTGAAAGC GTTCTTCGAC
AAGGACACCT ACACCAACAA CTTCATCGGC GCCGGCGGCA ACGGTGTGGC GATCGACGAC
TTCAACGCCG ACAACTTCGA CCATGGGCCG CACGGTTTCG TCGGCGGCTC GCCGATGTGG
GTCAACCAGG CCGGCAGCCG GCCGATTGCC GGTATTGCCA ACCCGCCCGG CACGCCCGCC
TGGGGCAGTG CCTGGAAGAA GGCCACGGCC GATTACTACA CCCACCAGCT GTCGATGGAC
GCCCACGGCG CGCACCAGTC GTACCGTGGC AACTACCTGG ACCTCGACCC GACCTACCGG
GATGCCTACG GCCAGCCGCT GCTGCGCATG ACTTTCGACT GGCAGGAAAA CGACATCAAG
ATGAACCAGT TCATGGTCGA CAAGCTGAGC AAGATCGCCC AGGCGATGAA CCCCAAGGCC
ATCGCTGTGC TAGGCAAGAA GGTCCAGGAG CACTTCAACA CCGCCAGCTA CCAGACCACC
CACCTCAACG GCGGCGCAAT CATGGGCACC GACCCCAAAA CCAGTGCCTT GAACCGCTAC
CTGCAAAGCT GGGACGTGCA CAACGTGTTC GTGCCGGGCG CATCGGCGTT CCCCCAAGGC
CTGGGTTACA ACCCCACCGG CCTGGTGGCT GCGCTGACCT ACTGGTCGGC GCGGGCCATC
CGGGAGCAGT ACCTGAAAAA CCCCGGCCCG CTGGTTCAGG CTTGA
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| Protein sequence | MANAMKKVDA VIVGFGWAGA IMAKELTEAG LQVVALERGP MQDTYPEGSY PQVIDELTYS
VRKKLFVDVS KETVTIRHSV NDVALPNRQL GAFLPGKGVG GAGLHWSGVH FRVDPMELRM
RSHYEERYGK RFIPEDMTIQ DFGVSYEELE PCFDFAEKVF GTSGQAWTVN GKVVGEGKGG
NPYAPDRSNP FPLVSQKNVV SAQLFQKATA SLGYKPYNLP SANTSGPYTN PYGAQMGPCN
FCGFCSGYVC YMYSKASPNV NILPALRQVP HFELRANAHV LRVNLDDSKR KATGVTYIDA
QGREVEQPAD IVILAAFQFN NVRLMLLSGI GKPYDPIKNE GVVGRNFAYQ NMGTVKAFFD
KDTYTNNFIG AGGNGVAIDD FNADNFDHGP HGFVGGSPMW VNQAGSRPIA GIANPPGTPA
WGSAWKKATA DYYTHQLSMD AHGAHQSYRG NYLDLDPTYR DAYGQPLLRM TFDWQENDIK
MNQFMVDKLS KIAQAMNPKA IAVLGKKVQE HFNTASYQTT HLNGGAIMGT DPKTSALNRY
LQSWDVHNVF VPGASAFPQG LGYNPTGLVA ALTYWSARAI REQYLKNPGP LVQA
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