| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2563 |
|---|
| Symbol | |
|---|
| ID | 6111514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2843411 |
|---|
| End bp | 2844694 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641622352 |
|---|
| Product | outer membrane porin |
|---|
| Protein accession | YP_001749426 |
|---|
| Protein GI | 170721738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0910723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTT CCGTCTCACG GCGGGCATCA CTGATGCTCG CGGCGTTGTG CTGTGCGTGG
CAATCGGCCC AGGCGGCCTT TGTCGCTGAC GGCAAAGGCA GCCTGGAGCT GCGCAATTTT
TACTTTGATC GCGACTTTCA CGGTGCTGCT GCCAGCCAGT CCAGGCGCGG TGAATGGGCC
CAGGGCTTTT TGCTCAAGTG GCAATCGGGC TACACCGAAG GTGTCGTCGG GTTTGGCCTG
GATGCGGCAG GGATGCTCGG CGTCAAGCTC GATTCATCCC CGGACCGCAG CGGCAGCGGG
CTGTTGCCCC GCGGCAGTGA CAGGCGCGCG GTGGATGGCT ATGGCAAGGC GGTTGCCACC
GTCAAGGCGA AGCTTTCGCA GACCCAACTG CAGCTGGGTG GTTTGAGCCC CCAGTTGCCA
TTGCTGGCGT CGAACTACAG CCGGTTGTTC CCGCAGTGGT TCAAGGGTAC CCAGTTGGTC
AGCAAGGACT TGGACCGTTT CACCTTTACC TTGCTGCAGG TCGATGCCAC CAAGCTGCGC
GACTCCACCG ACTTTGAAAG CCTGACCGCC ATGGCGCAAC AGGGCGCCTA TTCGGCAACG
GTGACCAGCG ACCGCCTGTA CTACGCGGGT GTCGATTATC AGCCGGCGAA GAGCCTGACC
CTCAGCGTGC ACACCAGTCA GCTTGAAGAC CTGTTCCAGC GGGACTTTGC GGGGTTCAAG
TACAGGGCCG GCCTTGGGCC GGGGGAGGCA TTCACCGAAT GGCGCTGGTT CAACGCGCAC
GACCAGGGCA GGGCGTTGCT GGGCGAGGTG GATAACCGGA CCTTGAGCAC CAACATCGGC
TATGGCCTGC ACGGGCATAC CTTCAGCGGT GGTTACCAGA AGGCCAGTGG AAATACCGCC
TACGCGTATG TTGGTGGGAC CGATACCTAC CTGTTCAGCG AGCAGCAGGT GAGCACTTTT
GCCTTGGCCA ACGAGCGGGC ATGGATGCTG CGTTACGACT ACAACTTTGC AGCATTGGGC
ATCCCGGGGC TGACGTTCAA TGTGCGCTAC GTCAAGGGTG ACCAGATCGA CCCACAGCGG
ATTGCCAGCA GCAAAGGCCG GGCGCTGGCC GCGCGGGGTG GCGAAGGTGA GGAGTGGGAG
CGGACCACCG ACATCAGCTA TGTAGTGCAG TCGGGGGTGT TCAGGAGCCT GGCGCTGCGT
TGGCGCAATG CGACCATGCG CTCCAATTTT GCCGATGCGG CGGATGAAAA TCGGGTGATC
GTGGGGTACA CGGTCGAGTT TTGA
|
|---|
| Protein sequence | MNTSVSRRAS LMLAALCCAW QSAQAAFVAD GKGSLELRNF YFDRDFHGAA ASQSRRGEWA
QGFLLKWQSG YTEGVVGFGL DAAGMLGVKL DSSPDRSGSG LLPRGSDRRA VDGYGKAVAT
VKAKLSQTQL QLGGLSPQLP LLASNYSRLF PQWFKGTQLV SKDLDRFTFT LLQVDATKLR
DSTDFESLTA MAQQGAYSAT VTSDRLYYAG VDYQPAKSLT LSVHTSQLED LFQRDFAGFK
YRAGLGPGEA FTEWRWFNAH DQGRALLGEV DNRTLSTNIG YGLHGHTFSG GYQKASGNTA
YAYVGGTDTY LFSEQQVSTF ALANERAWML RYDYNFAALG IPGLTFNVRY VKGDQIDPQR
IASSKGRALA ARGGEGEEWE RTTDISYVVQ SGVFRSLALR WRNATMRSNF ADAADENRVI
VGYTVEF
|
|---|
| |