Gene PputW619_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2554 
Symbol 
ID6111505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2832606 
End bp2835065 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content68% 
IMG OID641622343 
Producthypothetical protein 
Protein accessionYP_001749417 
Protein GI170721729 
COG category[M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.257329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCT TGCGGATCAC CGTGCAGGCC CTGTGCAGCC ATTGGTGGCG TCACCGGCTG 
CAGTGCATCA GCATCTTCAC CGGTTTGTGG CTGGCCACGG CCCTGTGGGC CGGCGTTCAG
GCGCTCAACA CTCAGGCGCG CAACGACTAC GCACAAGCCA GTGCGGTGCT CGCCGGGCCT
GCCCGCCCGC AATTGGTGGC ACGCTCGGGG CAGCGCTTCG ACCAGGCGCT GTATGTGCAA
TTGCGCAGGC TAGGCTGGCC GGTGACGCCG GTGCTGGAAG GGCGCTTGCG GCTGGCTGCA
GCGCCGCAGG TTGCGCTGCG CCTGGTCGGG ATCGAGCCGC TTGGCCTGTT GCCGGGCATG
GCCGTTGCCG GTGCCGATGT GCAGGATTTT GACCTGCAGG CGTTCGTGGG TACGCCGGGG
CAAGCGTGGG TGGGCCCGGA CACGCTGCGC CAGCTGGGGC GCCAACCCGG CGAGCAGCTG
ACCACGGTGG ACGGGCAAGT ATTGCCGCCG CTTACCATGC ATGCGCAGCT GGCACCGGGT
GTGGTGGTGG TCGACATCGG CCAGGCGCAG GCCTTGCTCA ATGCCCCCGG GCAATTGTCG
TGGCTGCTCA GCGACAGTGA CCAGCCACTG CCGAGCGACA TTGCGGCGAG GCTGAAGCTG
CAGCCGCCCG GGGATGATGC CGACCTGCAG CGGCTGACCG CCAGCTTTCA CCTGAACCTC
ACCGCCCTCG GCCTGCTGGC CTTCGTGGTG GGGCTGTTCA TTGCCCATGC GGCCATTGGC
CTGGCGCTGG AACAGCGGCG CGGGTTGATC CGCACCTTGC GCGCTTGTGG TGTGAGCTTG
CAGGTGCTGC TGGCAGCCCT TGCCCTGGAG CTGGGGTTGT TTGCCGTGCT GGGCGGTGTG
GCAGGCGTGG CTGCAGGTTA CCTGCTGGCC GCACTGATGC TGCCTGATTT CGCCTCCAGC
CTGCGCGGGC TTTATGGCGC CCAGGTGGCG GGGGAGCTGC ACTTGCCGGC CACCTGGTGG
CTGGCAGGCA TTGCCGTCAG CCTGTTGGGC GCGTTGCTGG CGGGGCTCGA CAGCCTGCTG
CGTGCCGCGC GCCTGCCATT GCTGGCCTTG GCGCAGCCCC AGGCCTGGCG CCTGGCGCAA
GTGCCGTGGT TGCGGCGCCA GGGTGGCGCC GGCGCCGTGC TGCTGATGGT GGCGGGGGGC
TGCGGCTACC TGGGCAATGG GCTGCCCAGT GCATTCGGCA TGCTGGCGGC TTTGCTGCTG
GCGGCGGCGC TGTTGTTGCC GGGGTTGCTG GCGCTCTTGC TCGGCGGCTT GGCGCGGGTG
TGCAAGCGCC CGCTGGCGCA GTGGTTCGTT GCCGACAGCC GCCAGCAACT ACCGGCCTTG
AGCCTGGCGT TGATGGCGCT GTTGCTGGCC TTGGCCGCCA GTGTCGGGGT TGGCGGCATG
ACCGAAGGCT TTCGCCGCAC CTTCATCGGC TGGCTGGACC AGCGCCTGGC CGCCGATGTG
TACGTCACGC CCCGCGACAG CGCGCAGGCG CAGCAGATCT ACGCGCGCTT GCTGGCAGAC
CGTACCGTCA GCGCGGTGCT GCCCAGCTGG CGGGTGGACT GGCGCCTGCA GCAGTGGCCG
GTGCAGGTAC AGGGGGTGGA TGATCACCCT TTCTACCGCC AGCACTGGCC ACTGCTGCAG
CAGGCACCGG GCGCCTGGCA GGCGCTGGCC GCCGGCCGTG GTGCAATGCT CAGCGAGCAA
CTTGCCCGTC GCCTTGGCCT GGCTGTAGGG CAGACGCTGC AGTTGCCTGG CGAGCCGCCC
CAGGCCATGA CCGTGGTGGG CGTTTATGCC GACTATGGCA ACCCCAAGGG CCATGTGCTG
GTAAACGCCG GCTGGTTGCG TAGCCATGCA CCAGCGGCCA GCCTTGCGGG TTTCAGCCTG
CTGGTGCCGC CTGAACGGGT GGCTGCGCTG AAGGATGAAC TGCAACGGCG CTATGCCCTG
GATGACAATC AGGTGGTGGA GCAGGCCCGC CTCAAAGCCT GGTCCAGCGA GGTGTTCAGC
CGCACCTTCG CGGTCACGGC GGCATTGAAC AGCCTGACTC TAGGGGTTGC CGGCGTGGCG
TTGTTCATCA GCCAGCTGAC CTTGAGCCAG CGCCGCCTGG GGCAGTTGGC ACCGTTGTGG
GCCTTGGGTG TACCACGGCG CTGGCTGGCC TGGCTGAGCC TGGGGCAAAC GCTGATGCTC
AGCTGCTTCA CCGTGCTGCT GGCGATCCCC TTGGGCCTGC TGCTGGCCTG GTGCCTGGTG
GCGGTGGTGA ATGTGCAGGC GTTCGGCTGG CGTCTGCCTT GGCATGTATT TACCGGGCAA
CTGGTGCAAC TGGCCGTACT GGGCCTGTTG ACTAGCCTGC TGGCCAGTGC CTGGCCGTTG
TGGCAACTGG CACGCAGCCA GCCAAGTGCG CTGTTGAGGC AATTTGCCGA TGAAAGCTGA
 
Protein sequence
MNSLRITVQA LCSHWWRHRL QCISIFTGLW LATALWAGVQ ALNTQARNDY AQASAVLAGP 
ARPQLVARSG QRFDQALYVQ LRRLGWPVTP VLEGRLRLAA APQVALRLVG IEPLGLLPGM
AVAGADVQDF DLQAFVGTPG QAWVGPDTLR QLGRQPGEQL TTVDGQVLPP LTMHAQLAPG
VVVVDIGQAQ ALLNAPGQLS WLLSDSDQPL PSDIAARLKL QPPGDDADLQ RLTASFHLNL
TALGLLAFVV GLFIAHAAIG LALEQRRGLI RTLRACGVSL QVLLAALALE LGLFAVLGGV
AGVAAGYLLA ALMLPDFASS LRGLYGAQVA GELHLPATWW LAGIAVSLLG ALLAGLDSLL
RAARLPLLAL AQPQAWRLAQ VPWLRRQGGA GAVLLMVAGG CGYLGNGLPS AFGMLAALLL
AAALLLPGLL ALLLGGLARV CKRPLAQWFV ADSRQQLPAL SLALMALLLA LAASVGVGGM
TEGFRRTFIG WLDQRLAADV YVTPRDSAQA QQIYARLLAD RTVSAVLPSW RVDWRLQQWP
VQVQGVDDHP FYRQHWPLLQ QAPGAWQALA AGRGAMLSEQ LARRLGLAVG QTLQLPGEPP
QAMTVVGVYA DYGNPKGHVL VNAGWLRSHA PAASLAGFSL LVPPERVAAL KDELQRRYAL
DDNQVVEQAR LKAWSSEVFS RTFAVTAALN SLTLGVAGVA LFISQLTLSQ RRLGQLAPLW
ALGVPRRWLA WLSLGQTLML SCFTVLLAIP LGLLLAWCLV AVVNVQAFGW RLPWHVFTGQ
LVQLAVLGLL TSLLASAWPL WQLARSQPSA LLRQFADES