Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2554 |
Symbol | |
ID | 6111505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2832606 |
End bp | 2835065 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641622343 |
Product | hypothetical protein |
Protein accession | YP_001749417 |
Protein GI | 170721729 |
COG category | [M] Cell wall/membrane/envelope biogenesis [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.257329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCT TGCGGATCAC CGTGCAGGCC CTGTGCAGCC ATTGGTGGCG TCACCGGCTG CAGTGCATCA GCATCTTCAC CGGTTTGTGG CTGGCCACGG CCCTGTGGGC CGGCGTTCAG GCGCTCAACA CTCAGGCGCG CAACGACTAC GCACAAGCCA GTGCGGTGCT CGCCGGGCCT GCCCGCCCGC AATTGGTGGC ACGCTCGGGG CAGCGCTTCG ACCAGGCGCT GTATGTGCAA TTGCGCAGGC TAGGCTGGCC GGTGACGCCG GTGCTGGAAG GGCGCTTGCG GCTGGCTGCA GCGCCGCAGG TTGCGCTGCG CCTGGTCGGG ATCGAGCCGC TTGGCCTGTT GCCGGGCATG GCCGTTGCCG GTGCCGATGT GCAGGATTTT GACCTGCAGG CGTTCGTGGG TACGCCGGGG CAAGCGTGGG TGGGCCCGGA CACGCTGCGC CAGCTGGGGC GCCAACCCGG CGAGCAGCTG ACCACGGTGG ACGGGCAAGT ATTGCCGCCG CTTACCATGC ATGCGCAGCT GGCACCGGGT GTGGTGGTGG TCGACATCGG CCAGGCGCAG GCCTTGCTCA ATGCCCCCGG GCAATTGTCG TGGCTGCTCA GCGACAGTGA CCAGCCACTG CCGAGCGACA TTGCGGCGAG GCTGAAGCTG CAGCCGCCCG GGGATGATGC CGACCTGCAG CGGCTGACCG CCAGCTTTCA CCTGAACCTC ACCGCCCTCG GCCTGCTGGC CTTCGTGGTG GGGCTGTTCA TTGCCCATGC GGCCATTGGC CTGGCGCTGG AACAGCGGCG CGGGTTGATC CGCACCTTGC GCGCTTGTGG TGTGAGCTTG CAGGTGCTGC TGGCAGCCCT TGCCCTGGAG CTGGGGTTGT TTGCCGTGCT GGGCGGTGTG GCAGGCGTGG CTGCAGGTTA CCTGCTGGCC GCACTGATGC TGCCTGATTT CGCCTCCAGC CTGCGCGGGC TTTATGGCGC CCAGGTGGCG GGGGAGCTGC ACTTGCCGGC CACCTGGTGG CTGGCAGGCA TTGCCGTCAG CCTGTTGGGC GCGTTGCTGG CGGGGCTCGA CAGCCTGCTG CGTGCCGCGC GCCTGCCATT GCTGGCCTTG GCGCAGCCCC AGGCCTGGCG CCTGGCGCAA GTGCCGTGGT TGCGGCGCCA GGGTGGCGCC GGCGCCGTGC TGCTGATGGT GGCGGGGGGC TGCGGCTACC TGGGCAATGG GCTGCCCAGT GCATTCGGCA TGCTGGCGGC TTTGCTGCTG GCGGCGGCGC TGTTGTTGCC GGGGTTGCTG GCGCTCTTGC TCGGCGGCTT GGCGCGGGTG TGCAAGCGCC CGCTGGCGCA GTGGTTCGTT GCCGACAGCC GCCAGCAACT ACCGGCCTTG AGCCTGGCGT TGATGGCGCT GTTGCTGGCC TTGGCCGCCA GTGTCGGGGT TGGCGGCATG ACCGAAGGCT TTCGCCGCAC CTTCATCGGC TGGCTGGACC AGCGCCTGGC CGCCGATGTG TACGTCACGC CCCGCGACAG CGCGCAGGCG CAGCAGATCT ACGCGCGCTT GCTGGCAGAC CGTACCGTCA GCGCGGTGCT GCCCAGCTGG CGGGTGGACT GGCGCCTGCA GCAGTGGCCG GTGCAGGTAC AGGGGGTGGA TGATCACCCT TTCTACCGCC AGCACTGGCC ACTGCTGCAG CAGGCACCGG GCGCCTGGCA GGCGCTGGCC GCCGGCCGTG GTGCAATGCT CAGCGAGCAA CTTGCCCGTC GCCTTGGCCT GGCTGTAGGG CAGACGCTGC AGTTGCCTGG CGAGCCGCCC CAGGCCATGA CCGTGGTGGG CGTTTATGCC GACTATGGCA ACCCCAAGGG CCATGTGCTG GTAAACGCCG GCTGGTTGCG TAGCCATGCA CCAGCGGCCA GCCTTGCGGG TTTCAGCCTG CTGGTGCCGC CTGAACGGGT GGCTGCGCTG AAGGATGAAC TGCAACGGCG CTATGCCCTG GATGACAATC AGGTGGTGGA GCAGGCCCGC CTCAAAGCCT GGTCCAGCGA GGTGTTCAGC CGCACCTTCG CGGTCACGGC GGCATTGAAC AGCCTGACTC TAGGGGTTGC CGGCGTGGCG TTGTTCATCA GCCAGCTGAC CTTGAGCCAG CGCCGCCTGG GGCAGTTGGC ACCGTTGTGG GCCTTGGGTG TACCACGGCG CTGGCTGGCC TGGCTGAGCC TGGGGCAAAC GCTGATGCTC AGCTGCTTCA CCGTGCTGCT GGCGATCCCC TTGGGCCTGC TGCTGGCCTG GTGCCTGGTG GCGGTGGTGA ATGTGCAGGC GTTCGGCTGG CGTCTGCCTT GGCATGTATT TACCGGGCAA CTGGTGCAAC TGGCCGTACT GGGCCTGTTG ACTAGCCTGC TGGCCAGTGC CTGGCCGTTG TGGCAACTGG CACGCAGCCA GCCAAGTGCG CTGTTGAGGC AATTTGCCGA TGAAAGCTGA
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Protein sequence | MNSLRITVQA LCSHWWRHRL QCISIFTGLW LATALWAGVQ ALNTQARNDY AQASAVLAGP ARPQLVARSG QRFDQALYVQ LRRLGWPVTP VLEGRLRLAA APQVALRLVG IEPLGLLPGM AVAGADVQDF DLQAFVGTPG QAWVGPDTLR QLGRQPGEQL TTVDGQVLPP LTMHAQLAPG VVVVDIGQAQ ALLNAPGQLS WLLSDSDQPL PSDIAARLKL QPPGDDADLQ RLTASFHLNL TALGLLAFVV GLFIAHAAIG LALEQRRGLI RTLRACGVSL QVLLAALALE LGLFAVLGGV AGVAAGYLLA ALMLPDFASS LRGLYGAQVA GELHLPATWW LAGIAVSLLG ALLAGLDSLL RAARLPLLAL AQPQAWRLAQ VPWLRRQGGA GAVLLMVAGG CGYLGNGLPS AFGMLAALLL AAALLLPGLL ALLLGGLARV CKRPLAQWFV ADSRQQLPAL SLALMALLLA LAASVGVGGM TEGFRRTFIG WLDQRLAADV YVTPRDSAQA QQIYARLLAD RTVSAVLPSW RVDWRLQQWP VQVQGVDDHP FYRQHWPLLQ QAPGAWQALA AGRGAMLSEQ LARRLGLAVG QTLQLPGEPP QAMTVVGVYA DYGNPKGHVL VNAGWLRSHA PAASLAGFSL LVPPERVAAL KDELQRRYAL DDNQVVEQAR LKAWSSEVFS RTFAVTAALN SLTLGVAGVA LFISQLTLSQ RRLGQLAPLW ALGVPRRWLA WLSLGQTLML SCFTVLLAIP LGLLLAWCLV AVVNVQAFGW RLPWHVFTGQ LVQLAVLGLL TSLLASAWPL WQLARSQPSA LLRQFADES
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