Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2541 |
Symbol | |
ID | 6111492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2820899 |
End bp | 2821690 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641622331 |
Product | aminoacyl-tRNA synthetase class I |
Protein accession | YP_001749405 |
Protein GI | 170721717 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.341313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGGCGTT GTCAGGCCGC TATTGAATTC TACTCTGGAG TTCAGTTTAC CGAAGGGGGA GGGTTGAATT ATGCAGAAAG CAATGCTCTT TATCCTAAGA GGCCTAATGT CAATCCAATA CTCGAAATAT CATATACTAG CGACTACGAC TTGGATTTTG AAGCTGCTAA TCATAAGGCT GGCCTTAATC AAAAAACAAC TCCTATCGGC CATGGATGGC ATCATGTGGA TGATTACGGC CCGGTCACTA GTAAAGGTAC TATGCAGTTG GTTGAACAGC CAGCTCACAG CGGTATTCCT CATATAGGTG GAGTGAGTCA ATATAAGGCT GCAACTGGAA AAACATATGT TCACCCAGCA AGTAAAAAGG AGTGGAAAAT CTTCATGTTG ATTCCATTGA GTGATACTGA AAAAGCAATA TCGTGCGCGG ATCTTGACTT TTTGGAAGAG GTATTGGGCG GCAGGCTGCC GCCGGAGTTT CGTCGGTTGT ACTTGTCATC GAATGGCGGT TATATTGGCG ATGCGCAAGG TGGGAATGAT TTGTTGCTTA CTGGATTTGT CCCTATTAAG TATGGTCGCA TTCCAATGGA CATAGCGTAT AGAGAGTTGG TCGAGGATTT TCCGCAAATG AAAGGGCGAG TGCCGTTTGC GTTTGATGAG GGTGGTAACT ATTTTTTGCT TACTCTGTCA GGAGAAGAGC AAGGTGAAGT CGGGTTGTGG ATTATGGATA CTGAGGAGTA TCATGTGGTT GCAGATGCTT TTCCTGAGTT TTTAAGTCGT CTCAATCAAT GA
|
Protein sequence | MWRCQAAIEF YSGVQFTEGG GLNYAESNAL YPKRPNVNPI LEISYTSDYD LDFEAANHKA GLNQKTTPIG HGWHHVDDYG PVTSKGTMQL VEQPAHSGIP HIGGVSQYKA ATGKTYVHPA SKKEWKIFML IPLSDTEKAI SCADLDFLEE VLGGRLPPEF RRLYLSSNGG YIGDAQGGND LLLTGFVPIK YGRIPMDIAY RELVEDFPQM KGRVPFAFDE GGNYFLLTLS GEEQGEVGLW IMDTEEYHVV ADAFPEFLSR LNQ
|
| |